YRC Public Data Repository - Protein Structure Prediction

Protein:	SPAC4G9.12
Organism:	Schizosaccharomyces pombe
Length:	193 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPAC4G9.12.

Description	E-value	Query Range	Subject Range
gi\|56962388, gi\|... - gi\|56962388\|ref\|YP_174114.1\| adenylylsulfate kinase [Bacillus clausii KSM-K16], gi\|56908626\|dbj\|BAD6...	159.0	[0..1]	[187..15]
gi\|114227886, gi... - gi\|78701063\|ref\|ZP_00865516.1\| Adenylylsulfate kinase:Sulfate adenylyltransferase, large subunit [Al...	152.0	[0..1]	[187..452]
gi\|15808380 - gi\|15808380\|gb\|AAL08416.1\| 3'-phosphoadenosine 5'-phosphosulfate synthase 2 [Takifugu rubripes]	152.0	[0..1]	[185..24]
gi\|74002093 - gi\|74002093\|ref\|XP_863147.1\| PREDICTED: similar to Bifunctional 3-phosphoadenosine 5-phosphosulfate ...	152.0	[0..7]	[187..46]
gi\|49481557, gi\|... - gi\|49481557\|ref\|YP_035639.1\| adenylylsulfate kinase [Bacillus thuringiensis serovar konkukian str. 9...	151.0	[0..1]	[186..12]
gi\|88860933, gi\|... - gi\|88860933\|ref\|ZP_01135569.1\| adenosine 5'-phosphosulfate kinase [Pseudoalteromonas tunicata D2], g...	151.0	[0..1]	[187..12]
gi\|116283813 - gi\|116283813\|gb\|AAH32513.1\| PAPSS1 protein [Homo sapiens]	150.0	[0..7]	[186..45]

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Predicted Domain #1

Region A:
Residues: [1-193]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTVTPINPTN QPYKYVFVVI GPAGSGKTTM AKAVSEKLGF EYIEGDDLHP KANIEKMSQG  60
   61 HPLNDNDRWG WLHNCGGACA MELDKESIKG VVLTCSALKR SYRDILRSSL EHRPAILRFI 120
  121 YLAASRETLI KRTTSRKNHY MKADMVESQL AILEAPTADE KDVITISVEN GKEQSEEECL 180
  181 DIVHKMVNEN KQP

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	29.69897
Match:	1knqA
Description:	Gluconate kinase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
catalytic activity	1.00104173493322	bayes_pls_golite062009
nucleic acid binding	0.277920206084984	bayes_pls_golite062009
binding	0.100582610715958	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: