| Protein: | ght4 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 557 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ght4.
| Description | E-value | Query Range |
Subject Range |
|
|
276.0 | [0..1] | [555..1] |
|
|
268.0 | [0..2] | [548..115] |
|
|
265.0 | [0..11] | [550..102] |
|
|
264.0 | [0..8] | [505..64] |
|
|
263.0 | [0..5] | [483..48] |
|
Region A: Residues: [1-457] |
1 11 21 31 41 51
| | | | | |
1 MGRTLTSVLV VFISMAGWLG GADTGSISGI LGMRDFQSRF ADRYNPITNS YSYSAWRQAL 60
61 LTGTVNAGCL FGAMLSSPFT EAIGKKYSIA FFSGCYIIGQ ILLVTAVPSW VQIMVGKLFT 120
121 GLTIGALSVL SPGYQSEVAP PQIRGAVVST YQLFQTCGTL IAACINMGTH KLRKTASWRT 180
181 SFGINILWGI FLMVGVLFLP ESPRYLIYKG RDEEALRIMC QTAELDPESE IIQTNFNTIK 240
241 SDIEMEMAGG KARWPEVFGK EVRYRTVLGF LTMLLRELIG NNYYFYYATQ VFKGTGMTDI 300
301 FLPAVILGAI NFGTTFGALY TIDNLGRRNP LIFGAAFQSI CFFIYAAVGD RKLIYKNGTS 360
361 DHRAGAVMIV FSCLFLFSYC CSWGPMGWVI VGETFPIRYR SKCAAVATSG NWLGNFMVSF 420
421 FTPFISNSIG FKLGYIYACI NMTSAFQIFL MAKETKG
|
| Detection Method: |  |
| Confidence: | 26.522879 |
| Match: | 1pw4A |
| Description: | Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [458-557] |
1 11 21 31 41 51
| | | | | |
1 LTLEEVNELY ESDIKPWDSY KYVRQIESRR IHFSKEEEKR EREKSKGYRG QEERFIENAD 60
61 GADNDDSSAS SESFASAGAH SRSVFPRRSN VSEESHPTWV
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.520 | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.434 | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.406 | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.357 | a.81.1 | N-terminal domain of DnaB helicase |
| View | Download | 0.261 | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.243 | a.60.1 | SAM/Pointed domain |
| View | Download | 0.239 | d.8.1 | Urease, gamma-subunit |
| View | Download | 0.233 | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.227 | d.8.1 | Urease, gamma-subunit |
| View | Download | 0.219 | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
