| Protein: | ght1 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 557 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ght1.
| Description | E-value | Query Range |
Subject Range |
|
|
280.0 | [0..2] | [557..115] |
|
|
280.0 | [0..1] | [543..1] |
|
|
278.0 | [0..11] | [557..102] |
|
|
273.0 | [0..2] | [556..32] |
|
|
265.0 | [0..9] | [525..1] |
|
Region A: Residues: [1-468] |
1 11 21 31 41 51
| | | | | |
1 MSKTLTITML LFVSMAGWMF GADTGSIGGI TNMRDFQSRF ADRYNPVTDT YSYSSARQGL 60
61 ITGMVNVGSF FGCLISSPTT DRIGKRNSII GFCVIYLIGV IIQVTAVPSW VQIMVAKIWT 120
121 GLGIGALSVL APGYQSEVAP PHIRGTIVVT YQLCVTAGIF IAACINMGTH KLYKTAQWRV 180
181 SIGINLLWGI ITLVGVSFLS ESPRYLVSIG KDDEAIQVMC KNAELPPDSD IIQTEYKQIK 240
241 SDCEAAVEGG PCTWPEIFGK EIRYRTFLGM AIMSFNQLTG CNYYFYYGTQ VFKGTGMESP 300
301 YLASLILDAV NFGCTFGGLF VLEYCGRRVP LIIGGVWQSI CFFIYAAVGN RALTRKNGTS 360
361 NHRAGAVMIV FSCLFIFSFA QTWGPAAYVI VGESYPIRYR SKCAAVATTS NWLWNFLISF 420
421 FTPFITNSIG FKYGYIFASC NLCASIVTFL FAHESKGLTL EEINELYL
|
| Detection Method: |  |
| Confidence: | 25.0 |
| Match: | 1pw4A |
| Description: | Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| glycerol transmembrane transporter activity | 7.11654923455995 | bayes_pls_golite062009 |
| alcohol transmembrane transporter activity | 6.7545566917184 | bayes_pls_golite062009 |
| polyol transmembrane transporter activity | 6.7545566917184 | bayes_pls_golite062009 |
| glycerol-3-phosphate transmembrane transporter activity | 5.74077413704789 | bayes_pls_golite062009 |
| transporter activity | 4.09176719149278 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 3.59744164024479 | bayes_pls_golite062009 |
| transmembrane transporter activity | 3.5865018981083 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 3.54194478414824 | bayes_pls_golite062009 |
| hexose phosphate transmembrane transporter activity | 3.3746965264994 | bayes_pls_golite062009 |
| glucose-6-phosphate transmembrane transporter activity | 3.3746965264994 | bayes_pls_golite062009 |
| sugar:hydrogen symporter activity | 2.99050613058546 | bayes_pls_golite062009 |
| cation:sugar symporter activity | 2.99050613058546 | bayes_pls_golite062009 |
| monosaccharide transmembrane transporter activity | 2.63293544825311 | bayes_pls_golite062009 |
| carbohydrate transmembrane transporter activity | 2.62141276633776 | bayes_pls_golite062009 |
| sugar transmembrane transporter activity | 2.47557586092261 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 2.21266150105753 | bayes_pls_golite062009 |
| solute:hydrogen symporter activity | 2.10485633822652 | bayes_pls_golite062009 |
| cation transmembrane transporter activity | 1.79369588808394 | bayes_pls_golite062009 |
| active transmembrane transporter activity | 1.59419818573076 | bayes_pls_golite062009 |
| binding | 1.46605775041083 | bayes_pls_golite062009 |
| secondary active transmembrane transporter activity | 1.22264637452409 | bayes_pls_golite062009 |
| symporter activity | 0.74591237387473 | bayes_pls_golite062009 |
| solute:cation symporter activity | 0.74591237387473 | bayes_pls_golite062009 |
|
Region A: Residues: [469-557] |
1 11 21 31 41 51
| | | | | |
1 SDAKPWMSRP KNLSEMAEAK EVEREETRPK GESARYLEHA DSNSDSEDLS SSANNDVHEP 60
61 VARQDPFNEN EVEKSRTRPS QESYTTSSN
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
