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View Structure Prediction Details

Protein: git11
Organism: Schizosaccharomyces pombe
Length: 72 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for git11.

Predicted Domain #1
Region A:
Residues: [1-72]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 METEALLNEK ISVQQARQEF ANYANNIPEP MMVSVAPPKA NPSVSSKTKQ QQHFKPGKAT  60
   61 KDKATTKCCT IS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.642 c.47.1 Thioredoxin-like
View Download 0.556 d.58.17 Metal-binding domain
View Download 0.526 c.47.1 Thioredoxin-like
View Download 0.504 c.47.1 Thioredoxin-like
View Download 0.404 d.58.17 Metal-binding domain
View Download 0.401 c.47.1 Thioredoxin-like
View Download 0.364 c.47.1 Thioredoxin-like
View Download 0.345 c.47.1 Thioredoxin-like
View Download 0.334 d.58.49 YajQ-like
View Download 0.317 d.74.3 RBP11-like subunits of RNA polymerase


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle