| Protein: | fin1 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 722 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for fin1.
| Description | E-value | Query Range |
Subject Range |
|
|
358.0 | [0..3] | [674..55] |
|
|
358.0 | [0..3] | [674..55] |
|
|
357.0 | [0..3] | [674..55] |
|
|
354.0 | [0..3] | [674..55] |
|
|
353.0 | [0..3] | [674..55] |
|
Region A: Residues: [1-323] |
1 11 21 31 41 51
| | | | | |
1 MEKYKILECI GHGSFGRIYK VQRLKDGALL AQKEIHFGNI TRQEKQYIAD EVNILRNLKH 60
61 PNIVQYCGEE LNRSAQVINL YMEYCGHGDL ANLIQRYKEE KKRFTEQEVL KFFTQLLLAL 120
121 YRCHYGENAP ACDSQWPREI FHPKQSVLHR DIKPANIFLD ENNSVKLGDF GLSKLLDNTR 180
181 VFTQSYVGTP YYMSPEIIRS SPYSAKSDVW ALGCVIFEIC MLTHPFEGRS YLELQRNICQ 240
241 GNLSCWDHHY SDDVFLLIRH CLEVNSDLRP TTYQLLRSPI LSDIRSKLES ERVVLEQSDL 300
301 LHKKHQMLIQ LENDLQFREQ RLS
|
| Detection Method: |  |
| Confidence: | 72.0 |
| Match: | 1gzkA |
| Description: | Pkb kinase |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [324-490] |
1 11 21 31 41 51
| | | | | |
1 ARESELENVI ASRLAQREEI LRRELEKQLR DMDARYQRHM QTVVNSMQKM RVTSPVDHNE 60
61 QPESSTAEMF VDCTIEASQS PLLHIPKLGI SKPLQTLSCP GFTLTTQQPI LKRPTLRKEL 120
121 SSRALHTTAT LMKYRANASS LRTTPIDKDG QITSLQQKNG TSNQVAD
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [491-618] |
1 11 21 31 41 51
| | | | | |
1 CMNKLLHTSL DGKKLSPSEL CNKFSDGEGL PNRKVSKLSV ESDETAVSAS SGESVPTDST 60
61 LTDTKSKSVF VHPPSPQSLY VEKLEKLNIR SDEVSKPSKA SKTLHGYALP SLASPYDVHA 120
121 EEKIAREN
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.235 | d.20.1 | UBC-like |
| View | Download | 0.210 | d.95.2 | Homing endonucleases |
|
Region A: Residues: [619-722] |
1 11 21 31 41 51
| | | | | |
1 EMDGNFKTMK INQHPDEYVL RTPKKIQLLE GQKRSPVKQL GRLGYNKLRR SAMDNAGLEL 60
61 RKAASTSNYT SLQSRTLPGS WRDDEEEIPR PFLRKMLDAR MMRA
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.555 | a.35.1 | lambda repressor-like DNA-binding domains |
| View | Download | 0.525 | a.7.6 | Ribosomal protein S20 |
| View | Download | 0.481 | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.479 | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.439 | a.118.1 | ARM repeat |
| View | Download | 0.415 | a.24.26 | Description not found. |
| View | Download | 0.345 | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.337 | a.24.10 | Histidine-containing phosphotransfer domain, HPT domain |
| View | Download | 0.336 | a.78.1 | Fatty acid responsive transcription factor FadR, C-terminal domain |
