YRC Public Data Repository - Protein Structure Prediction

Protein:	dpm2
Organism:	Schizosaccharomyces pombe
Length:	72 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for dpm2.

Description	E-value	Query Range	Subject Range
gi\|88181693, gi\|... - gi\|88181693\|gb\|EAQ89161.1\| hypothetical protein CHGG_05780 [Chaetomium globosum CBS 148.51], gi\|1161...	117.0	[0..2]	[67..112]
gi\|50757410 - gi\|50757410\|ref\|XP_415511.1\| PREDICTED: similar to RIKEN cDNA C230093N12 [Gallus gallus]	111.0	[0..2]	[71..543]
gi\|85079591 - gi\|85079591\|ref\|XP_956377.1\| hypothetical protein NCU00067 [Neurospora crassa OR74A] gi\|28917439, gi\|... - gi\|32403080\|ref\|XP_322153.1\| hypothetical protein [Neurospora crassa], gi\|28917439\|gb\|EAA27141.1\| hy...	91.0	[0..2]	[67..1]
gi\|46125671, gi\|... - gi\|46125671\|ref\|XP_387389.1\| hypothetical protein FG07213.1 [Gibberella zeae PH-1], gi\|42554968\|gb\|E...	89.0	[0..2]	[67..10]
gi\|73968174 - gi\|73968174\|ref\|XP_851419.1\| PREDICTED: similar to phosphatidylinositol-4-phosphate 5-kinase-like 1 ...	89.0	[0..2]	[62..144]
gi\|66823421, gi\|... - gi\|66823421\|ref\|XP_645065.1\| dolichyl-phosphate mannosyltransferase 2 regulatory subunit [Dictyostel... DPM2_DICDI - Dolichol phosphate-mannose biosynthesis regulatory protein OS=Dictyostelium discoideum GN=dpm2-1 PE=...	87.0	[0..1]	[69..11]
gi\|12324795, gi\|... - gi\|51968958\|dbj\|BAD43171.1\| putative dolichyl-phosphate mannosyltransferase polypeptide 2 [Arabidops...	86.0	[0..10]	[70..20]
DPM2_BOVIN - Dolichol phosphate-mannose biosynthesis regulatory protein OS=Bos taurus GN=DPM2 PE=3 SV=3	85.0	[0..2]	[66..13]
gi\|111071379 - gi\|111071379\|gb\|EAT92499.1\| hypothetical protein SNOG_01004 [Phaeosphaeria nodorum SN15]	83.0	[0..2]	[67..12]
gi\|66847684, gi\|... - gi\|70990406\|ref\|XP_750052.1\| dolichol phosphate-mannose biosynthesis regulatory protein Dpm2 [Asperg... gi\|159130531 - gi\|159130531\|gb\|EDP55644.1\| dolichol phosphate-mannose biosynthesis regulatory protein Dpm2, putativ...	82.0	[0..2]	[67..1]

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Predicted Domain #1

Region A:
Residues: [1-72]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIVYISTAAF LYYTIWVLIM PFVDNMNISQ KLFLDREWAI TIPVAVMLFG ICLIGTFVSL  60
   61 LMIKSSKKKS DL

[Run NCBI BLAST on this sequence.]

Detection Method:	Pfam
Confidence:	10.568636
Match:	PF07297.3
Description:	No description for PF07297.3 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits