YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: cut12
Organism: Schizosaccharomyces pombe
Length: 548 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

No multiple sequence alignment data found for cut12.

Predicted Domain #1
Region A:
Residues: [1-182]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSETLNTPPT YAWVLKAFSS KLAGTVTKPV TKMSSYIEDA ESDAELPQDA KEDLRPTETL  60
   61 TPLKSKAAQN GILKTPGTLQ IKKTVNFKDI SKDAATWNRP TKNNFLFTRL DDENPLMGHE 120
  121 EFKSPLLQST PKPNINNPDN ENKSKHDEFD NRYNININES YKNETKSNQR LGEDVPSKKK 180
  181 YP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [183-400]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 HSMDAEISKF KWDSNNNNDW SSLMKDCFRD VVNNNRKMKE IIKDVMIDTS QAFPSESLDE  60
   61 PDYTINLDAP RSSSGKYWKQ KFSMLDSAHS DLELELTSIR ERLESLILEK QEEINFWKQR 120
  121 CRALETEKIH NHQGQQSKYK GKEFVGNRFS QMRELYTAKP SPITTKVVSR PSQSDVREPQ 180
  181 EQVPSKNLHR GADMSHLAAQ MLTHSSKKSH TTNLIPSE

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [401-548]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GIISSTPISA ASKVRMNLMQ SNQTPTPAPF SIAAKKSHLP SKLSFPQDGG SLSSATTLQQ  60
   61 LPKARVTPNV LSSLSSNLGK TNPTSVYQSK ANVTTSADVE KPQVKVATSS RVDYDLKSPN 120
  121 QRTANAKKRL EERRRRRKLK LQELQLNS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle