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View Structure Prediction Details

Protein: bis1
Organism: Schizosaccharomyces pombe
Length: 384 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for bis1.

Description E-value Query
Range
Subject
Range
gi|17862920 - gi|17862920|gb|AAL39937.1| SD03464p [Drosophila melanogaster]
403.0 [0..1] [380..22]
gi|118794889, gi... - gi|118794889|ref|XP_321797.3| ENSANGP00000016921 [Anopheles gambiae str. PEST], gi|116116511|gb|EAA0...
374.0 [0..5] [382..25]
gi|148665076, gi... - gi|74203875|dbj|BAE28534.1| unnamed protein product [Mus musculus], gi|148665076|gb|EDK97492.1| expr...
360.0 [0..24] [381..35]
gi|46126037, gi|... - gi|46126037|ref|XP_387572.1| hypothetical protein FG07396.1 [Gibberella zeae PH-1], gi|42554412|gb|E...
360.0 [0..4] [380..14]
gi|149019763, gi... - gi|60223077|ref|NP_001012490.1| DiGeorge syndrome critical region protein 14 [Rattus norvegicus], gi...
358.0 [0..24] [381..35]

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Predicted Domain #1
Region A:
Residues: [1-95]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLAKKIDDD EKQLVKPVNK EQTYKKPIPL EEDDYIEGLS YIIQQQYFPD LPKLKAEVVL  60
   61 ESEEVGSFDA QNESRDEKLK YLIAKNSEDP LRKRL

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [96-316]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PSLAIHEITK AQLDGENKPI SVASYQNKFT SEDNASFGEL MEDESRLRAE QHKRRFGVHS  60
   61 QQPSNSIQTI GYSNSDAIKS IAWKEKDKSI KTWNYQPKNA LMYTPETNHS SSLSQIKKQS 120
  121 TEIQADATGL SQSFLEAANQ PSTDPIVPPS VNETDASVNG YPLVDVNFGQ AVGSSSKSYF 180
  181 NIPERPRRER LHAMRVRDIR SHSTNTTITS VDSASTALNS Y

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [317-384]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 STPNSVSRKL TNLTPAARRL VARSYLRSPL HGSSPSASRH TALRTSIPKF SWTPTPRVKS  60
   61 TAPTPKRV

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle