YRC Public Data Repository - Protein Structure Prediction

Protein:	aur1
Organism:	Schizosaccharomyces pombe
Length:	422 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

[What does the above image mean?]

[Show Ginzu Version Information]

Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for aur1.

Description	E-value	Query Range	Subject Range
gi\|1817522 - gi\|1817522\|dbj\|BAA19190.1\| Aur1 [Schizosaccharomyces pombe]	634.0	[0..1]	[422..1]
gi\|7144496 - gi\|7144496\|gb\|AAD28748.2\|AF126179_1 inositolphosphorylceramide synthase; IPC1p [Candida tropicalis]	534.0	[0..7]	[421..22]
gi\|4558826 - gi\|4558826\|gb\|AAD22749.1\|AF076691_1 aureobasidin-resistance protein; AurA [Aspergillus nidulans]	505.0	[0..8]	[363..43]
gi\|4558828 - gi\|4558828\|gb\|AAD22750.1\|AF076692_1 aureobasidin-resistance protein; Aur1 homolog; Aur1 [Aspergillus...	499.0	[0..5]	[363..42]
gi\|159127637 - gi\|159127637\|gb\|EDP52752.1\| aureobasidin resistance protein Aur1 [Aspergillus fumigatus A1163] gi\|70999812, gi\|... - gi\|70999812\|ref\|XP_754623.1\| aureobasidin resistance protein Aur1 [Aspergillus fumigatus Af293], gi\|...	499.0	[0..5]	[363..42]
gi\|40741879, gi\|... - gi\|67537642\|ref\|XP_662595.1\| hypothetical protein AN4991.2 [Aspergillus nidulans FGSC A4], ref\|XP_40...	497.0	[0..8]	[363..43]
gi\|169770439 - gi\|169770439\|ref\|XP_001819689.1\| hypothetical protein [Aspergillus oryzae RIB40] gi\|83767548 - gi\|83767548\|dbj\|BAE57687.1\| unnamed protein product [Aspergillus oryzae] gi\|238487150, gi... - gi\|238487150\|ref\|XP_002374813.1\| aureobasidin resistance protein Aur1 [Aspergillus flavus NRRL3357],...	497.0	[0..5]	[363..42]
gi\|115396114, gi... - gi\|115396114\|ref\|XP_001213696.1\| hypothetical protein ATEG_04518 [Aspergillus terreus NIH2624], gi\|1...	491.0	[0..5]	[363..42]
gi\|28921383, gi\|... - gi\|32421229\|ref\|XP_331058.1\| hypothetical protein [Neurospora crassa], gi\|28921383\|gb\|EAA30690.1\| hy... gi\|85094637 - gi\|85094637\|ref\|XP_959926.1\| hypothetical protein NCU02282 [Neurospora crassa OR74A]	491.0	[0..4]	[359..28]
gi\|46105420, gi\|... - gi\|46105420\|ref\|XP_380514.1\| hypothetical protein FG00338.1 [Gibberella zeae PH-1], gi\|42544526\|gb\|E...	481.0	[0..8]	[357..38]

Back

Predicted Domain #1

Region A:
Residues: [1-107]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSALSTLKKR LAACNRASQY KLETSLNPMP TFRLLRNTKW SWTHLQYVFL AGNLIFACIV  60
   61 IESPGFWGKF GIACLLAIAL TVPLTRQIFF PAIVIITWAI LFYSCRF

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2

Region A:
Residues: [108-320]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 IPERWRPPIW VRVLPTLENI LYGSNLSSLL SKTTHSILDI LAWVPYGVMH YSAPFIISFI  60
   61 LFIFAPPGTL PVWARTFGYM NLFGVLIQMA FPCSPPWYEN MYGLEPATYA VRGSPGGLAR 120
  121 IDALFGTSIY TDGFSNSPVV FGAFPSLHAG WAMLEALFLS HVFPRYRFCF YGYVLWLCWC 180
  181 TMYLTHHYFV DLVGGMCLAI ICFVFAQKLR LPQ

[Run NCBI BLAST on this sequence.]

Detection Method:	FFAS03
Confidence:	3.03
Match:	1d2tA
Description:	Bacterial acid phosphatase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
phosphoric ester hydrolase activity	1.09155297331115	bayes_pls_golite062009
catalytic activity	0.732568437339568	bayes_pls_golite062009

Predicted Domain #3

Region A:
Residues: [321-422]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LQTGKILRWE YEFVIHGHGL SEKTSNSLAR TGSPYLLGRD SFTQNPNAVA FMSGLNNMEL  60
   61 ANTDHEWSVG SSSPEPLPSP AADLIDRPAS TTSSIFDASH LP

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: