| Protein: | SPCC1672.11c |
| Organism: | Schizosaccharomyces pombe |
| Length: | 1315 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPCC1672.11c.
| Description | E-value | Query Range |
Subject Range |
|
|
861.0 | [0..10] | [1310..28] |
|
|
848.0 | [0..11] | [1311..71] |
|
|
827.0 | [0..10] | [1235..28] |
|
|
793.0 | [0..9] | [1308..36] |
|
|
758.0 | [0..11] | [1311..20] |
|
|
732.0 | [0..2] | [1311..5] |
|
|
731.0 | [0..268] | [1289..153] |
|
|
730.0 | [0..247] | [1289..8] |
|
|
726.0 | [0..256] | [1289..6] |
|
|
726.0 | [0..245] | [1289..7] |
|
Region A: Residues: [1-140] |
1 11 21 31 41 51
| | | | | |
1 MASPKMIRSK RSTSSIASKN SLNSYLASSL MSHDSIFDGP GLGTSIPSSV SSFHHQTLRP 60
61 SSDASVSQFS MDYLQSEYNL NRYNDGESIA ASRDYQSLLR DNGSGVYSDE EEITEMMLEE 120
121 LNIHPVLRRE SVGEAAGLSE
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [141-278] |
1 11 21 31 41 51
| | | | | |
1 DGCCQILYLV EEDLEVGIAG YKTNKSRYRL YQAICLLTLG LAYLIFRWLP KYFIRFVGTR 60
61 EPLATADWLT IETQWGELSK LDIQIQPYEN SLSSIFGASI RVAAPEGTEN DPFIENFRYV 120
121 NYRYMKLIFH PLLDRFLI
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [279-1315] |
1 11 21 31 41 51
| | | | | |
1 QQDWKDPRWI RDTSVVKEGL ERDAINDRLC IFGENLIDLE LKSVSQLLID EVLHPFYIFQ 60
61 VFSIILWSMD SYYYYAICIL IISVVSILGS LIETRKTLRR MREMSRFTCP VRVYRDGFWT 120
121 SISSTDLVIG DVFEISDPEL TIFPADALLL SGDCIVNESM LTGESIPVSK IPATDQSMKE 180
181 LFSFSKNIPA SLCKHFLFSG TKIIQVRKPF VNEKEEGASL AMVVRTGFNT TKGALVRSMI 240
241 FPKPTNFSFY RDSFRFITAM FIIALIGFVF SSINLLTLGV PIATIIIRAL DLITIVVPPA 300
301 LPATLTIGTT FAISRLRKQG IFCISPQRVN VSGKLDLISF DKTGTLTEDG LDIMGVSVIE 360
361 GSELGDLRSN SGNLCSKDLL SNDSPSNLLY TMATCHMLRY VDGELVGDPL DIKMFKFTHW 420
421 SYSEENFLNK KMSSEQAEDA AYVRTQQLIP PTVSPPWNSP SNNYTESDLE LGIVRTFEFV 480
481 SQLRRMAVIV KHGKFKKMDA YVKGAPEIMP SICKPESFPA NYQEVLDYYT HNGFRVIACA 540
541 SKQLENCTWA KAQRMKREQV ECDLDFCGFI VFENKLKSTT ATVIRELNDA RIRTVMCTGD 600
601 NVLTSICVGK RCGMLPEDGY VFLPRFDEES ESADEASRQL VWQAIENNEI FLDPHTLRPN 660
661 VDFADHEPVS IELARLKDFH IALTGDVFRW LVDYAPLNVF HHILLKAQIF ARMSPSEKNE 720
721 LVSCFQNLNY CVGFCGDGAN DCGALKAADV GISLSEAEAS VAAPFTSKWF EITCVLDVIK 780
781 DGRAALVTSF SCFQYMALYS AIQFITVSIL YTTNSNLGDF QFLFIDLVII LPIAVFMGRS 840
841 RPYHRLAHKR PTANLVSKRI LSPLIGQIVL ICIIQYITLR IVRREPWYIP PPANSSDTNI 900
901 TNSDVTALFL ISCFQYIFIG VVLSIGPPYR EKVWRNYSFT AVVVVLLILT VKLIRLQNHK 960
961 NFFMKLFQLT PTSKSFQNFL IFAGVIYYLL AASGQNYIFI SMTNFISHLN NRLLNRRTKV1020
1021 SKKLYKRLFA DLQNEQV
|
| Detection Method: | |
| Confidence: | 161.0 |
| Match: | 1iwoA |
| Description: | Calcium ATPase, transduction domain A; Calcium ATPase, catalytic domain P; Calcium ATPase; Calcium ATPase, transmembrane domain M |
Matching Structure (courtesy of the PDB): |
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