YRC Public Data Repository - Protein Structure Prediction

Protein:	arg12
Organism:	Schizosaccharomyces pombe
Length:	410 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for arg12.

Description	E-value	Query Range	Subject Range
ASSY_BACHD - Argininosuccinate synthase OS=Bacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM... ASSY_BACHD - Argininosuccinate synthase OS=Bacillus halodurans GN=argG PE=3 SV=1	494.0	[0..3]	[407..1]
ASSY_BACLD - Argininosuccinate synthase OS=Bacillus licheniformis (strain ATCC 14580 / DSM 13 / JCM 2505 / NBRC 1...	490.0	[0..2]	[407..1]
ASSY_METFK - Argininosuccinate synthase OS=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) GN=arg...	489.0	[0..2]	[408..1]
gi\|254826266 - gi\|254826266\|ref\|ZP_05231267.1\| argininosuccinate synthase [Listeria monocytogenes FSL J1-194] ASSY_LISMC - Argininosuccinate synthase OS=Listeria monocytogenes serotype 4b (strain Clip81459) GN=argG PE=3 SV=... gi\|254879730 - gi\|254879730\|ref\|ZP_05252440.1\| argininosuccinate synthase [Listeria monocytogenes FSL J2-071] gi\|254854078 - gi\|254854078\|ref\|ZP_05243426.1\| argininosuccinate synthase [Listeria monocytogenes FSL R2-503] gi\|153167967, gi... - gi\|254871759\|ref\|ZP_05244469.1\| argininosuccinate synthase [Listeria monocytogenes FSL N1-017], gi\|1... gi\|153203193, gi... - gi\|254931801\|ref\|ZP_05265160.1\| argininosuccinate synthase [Listeria monocytogenes HPB2262], gi\|1532... gi\|255520760 - gi\|255520760\|ref\|ZP_05387997.1\| argininosuccinate synthase [Listeria monocytogenes FSL J1-175] ASSY_LISMC - Argininosuccinate synthase OS=Listeria monocytogenes serotype 4b (strain CLIP80459) GN=argG PE=3 SV=... ASSY_LISMH - Argininosuccinate synthase OS=Listeria monocytogenes serotype 4a (strain HCC23) GN=argG PE=3 SV=1 gi\|224498464 - gi\|224498464\|ref\|ZP_03666813.1\| argininosuccinate synthase [Listeria monocytogenes Finland 1988] ASSY_LISMF - Argininosuccinate synthase OS=Listeria monocytogenes serotype 4b (strain F2365) GN=argG PE=3 SV=1 gi\|47091758, gi\|... - gi\|47091758\|ref\|ZP_00229553.1\| argininosuccinate synthase [Listeria monocytogenes str. 4b H7858], gi...	487.0	[0..3]	[407..1]
ASSY_BACCN - Argininosuccinate synthase OS=Bacillus cytotoxicus (strain DSM 22905 / CIP 110041 / 391-98 / NVH 391...	486.0	[0..3]	[407..1]
gi\|221324414 - gi\|221324414\|ref\|ZP_03605708.1\| argininosuccinate synthase [Bacillus subtilis subsp. subtilis str. S... gi\|221315214 - gi\|221315214\|ref\|ZP_03597019.1\| argininosuccinate synthase [Bacillus subtilis subsp. subtilis str. N... gi\|221320132 - gi\|221320132\|ref\|ZP_03601426.1\| argininosuccinate synthase [Bacillus subtilis subsp. subtilis str. J... ASSY_BACSU - Argininosuccinate synthase OS=Bacillus subtilis (strain 168) GN=argG PE=3 SV=1 ASSY_BACSU - Argininosuccinate synthase OS=Bacillus subtilis GN=argG PE=3 SV=1	486.0	[0..2]	[407..1]
ASSY_BACCZ - Argininosuccinate synthase OS=Bacillus cereus (strain ZK / E33L) GN=argG PE=3 SV=1 gi\|196025249, gi... - gi\|196043913\|ref\|ZP_03111150.1\| argininosuccinate synthase [Bacillus cereus 03BB108], gi\|196025249\|g... ASSY_BACC3 - Argininosuccinate synthase OS=Bacillus cereus (strain 03BB102) GN=argG PE=3 SV=1 ASSY_BACAH - Argininosuccinate synthase OS=Bacillus thuringiensis (strain Al Hakam) GN=argG PE=3 SV=2	486.0	[0..3]	[407..1]
ASSY_GEOKA - Argininosuccinate synthase OS=Geobacillus kaustophilus GN=argG PE=3 SV=1 ASSY_GEOKA - Argininosuccinate synthase OS=Geobacillus kaustophilus (strain HTA426) GN=argG PE=3 SV=1	486.0	[0..3]	[407..1]
gi\|254754624 - gi\|254754624\|ref\|ZP_05206659.1\| argininosuccinate synthase [Bacillus anthracis str. Vollum] gi\|254757456 - gi\|254757456\|ref\|ZP_05209483.1\| argininosuccinate synthase [Bacillus anthracis str. Australia 94] gi\|254736741 - gi\|254736741\|ref\|ZP_05194447.1\| argininosuccinate synthase [Bacillus anthracis str. Western North Am... gi\|254741778 - gi\|254741778\|ref\|ZP_05199465.1\| argininosuccinate synthase [Bacillus anthracis str. Kruger B] gi\|30264704, gi\|... - gi\|30264704\|ref\|NP_847081.1\| argininosuccinate synthase [Bacillus anthracis str. Ames], gi\|30259379\|... ASSY_BACAN - Argininosuccinate synthase OS=Bacillus anthracis GN=argG PE=3 SV=1 gi\|49187522, gi\|... - gi\|49187522\|ref\|YP_030775.1\| argininosuccinate synthase [Bacillus anthracis str. Sterne], gi\|4918144... gi\|47530173, gi\|... - gi\|47530173\|ref\|YP_021522.1\| argininosuccinate synthase [Bacillus anthracis str. 'Ames Ancestor'], g... gi\|177651161, gi... - gi\|177651161\|ref\|ZP_02933992.1\| argininosuccinate synthase [Bacillus anthracis str. A0174], gi\|17208... gi\|170129515, gi... - gi\|170705390\|ref\|ZP_02895854.1\| argininosuccinate synthase [Bacillus anthracis str. A0389], gi\|17012... gi\|190569076, gi... - gi\|190569076\|ref\|ZP_03021976.1\| argininosuccinate synthase [Bacillus anthracis Tsiankovskii-I], gi\|1... gi\|167634048, gi... - gi\|167634048\|ref\|ZP_02392371.1\| argininosuccinate synthase [Bacillus anthracis str. A0442], gi\|16753... gi\|254687441 - gi\|254687441\|ref\|ZP_05151297.1\| argininosuccinate synthase [Bacillus anthracis str. CNEVA-9066] gi\|164714431, gi... - gi\|165869602\|ref\|ZP_02214260.1\| argininosuccinate synthase [Bacillus anthracis str. A0488], gi\|16471... gi\|254725004 - gi\|254725004\|ref\|ZP_05186787.1\| argininosuccinate synthase [Bacillus anthracis str. A1055] gi\|170685699, gi... - gi\|170685699\|ref\|ZP_02876922.1\| argininosuccinate synthase [Bacillus anthracis str. A0465], gi\|17067... ASSY_BACAC - Argininosuccinate synthase OS=Bacillus anthracis (strain CDC 684 / NRRL 3495) GN=argG PE=3 SV=1 gi\|167513930, gi... - gi\|167638113\|ref\|ZP_02396391.1\| argininosuccinate synthase [Bacillus anthracis str. A0193], gi\|16751... ASSY_BACAA - Argininosuccinate synthase OS=Bacillus anthracis (strain A0248) GN=argG PE=3 SV=1	486.0	[0..3]	[407..1]
ASSY_BACHK - Argininosuccinate synthase OS=Bacillus thuringiensis subsp. konkukian (strain 97-27) GN=argG PE=3 SV... ASSY_BACHK - Argininosuccinate synthase OS=Bacillus thuringiensis subsp. konkukian GN=argG PE=3 SV=1	484.0	[0..3]	[407..1]

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Predicted Domain #1

Region A:
Residues: [1-410]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPQEVKRCVL AYSGGLDTSC ILAWLIEEGW EVICYMANVG QEEDWDAARE KALKVGAKKV  60
   61 YVEDLREEFI NDTVIPAAQA NAIYENVYLL GTSLARPIIA RRQIQIAEKE NCIAVSHGCT 120
  121 GKGNDQVRFE LAYYALKPDV QVIAPWRLPV FFERFAGRKD LLEYAAAKGI PVTQTTKKPW 180
  181 SMDENIVHCS YEAGILEDPS MTPPKDMWKL TVDPKDAPDE VEELSIHFEK GAPTKLECKD 240
  241 GTFSGVVSIF YQLNAIARRN GVGRIDIVEN RFSGLKSRGC YETPGLTILR TAHMDLEGLT 300
  301 MEREVRALRD QFVTFNLAKI LYNGQFFSPC TRMLLAANNV SQEVVNGVVK LSVYKGNVTV 360
  361 LGRKSDTAHL YDEKLSSMDE LGGFDPTWTS GFIQIESMRL RNSDEGKHWM

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	131.0
Match:	2nz2A
Description:	No description for 2nz2A was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits