YRC Public Data Repository - Protein Structure Prediction

Protein:	SPAC13G7.05
Organism:	Schizosaccharomyces pombe
Length:	537 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPAC13G7.05.

Description	E-value	Query Range	Subject Range
gi\|39977761, gi\|... - gi\|39977761\|ref\|XP_370268.1\| hypothetical protein MGG_06765 [Magnaporthe grisea 70-15], gb\|EAA55108....	514.0	[0..12]	[536..36]
gi\|32405742, gi\|... - gi\|32405742\|ref\|XP_323484.1\| related to acyl-CoA sterol acyltransferase [MIPS] [Neurospora crassa], ... gi\|85102248 - gi\|85102248\|ref\|XP_961300.1\| related to acyl-CoA sterol acyltransferase [MIPS] [Neurospora crassa OR...	510.0	[0..12]	[536..36]
gi\|1389739 - gi\|1389739\|gb\|AAC49441.1\| acyl-CoA:sterol acyltransferase	505.0	[0..32]	[537..149]
gi\|42544330, gi\|... - gi\|46110268\|ref\|XP_382192.1\| hypothetical protein FG02016.1 [Gibberella zeae PH-1], gi\|42544330\|gb\|E...	491.0	[0..12]	[536..35]
ARE2_SACBA - Sterol O-acyltransferase 2 OS=Saccharomyces bayanus GN=ARE2 PE=3 SV=1 ARE2_SACU7 - Sterol O-acyltransferase 2 OS=Saccharomyces uvarum (strain ATCC 76518 / CBS 7001 / CLIB 283 / NBRC 1...	485.0	[0..32]	[537..157]
gi\|49093768, gi\|... - gi\|67527926\|ref\|XP_661812.1\| hypothetical protein AN4208.2 [Aspergillus nidulans FGSC A4], ref\|XP_40...	477.0	[0..39]	[529..31]
gi\|28564191 - gi\|28564191\|gb\|AAO32474.1\| ARE2 [Saccharomyces castellii]	476.0	[0..6]	[537..39]
gi\|10803053 - gi\|10803053\|gb\|AAG23696.1\|AF298815_1 diacylglycerol acyltransferase [Perilla frutescens]	476.0	[0..11]	[534..50]
gi\|50294790, gi\|... - gi\|50294790\|ref\|XP_449806.1\| hypothetical protein CAGL0M10571g [Candida glabrata CBS138], gi\|4952912... gi\|49529120 - gi\|49529120\|emb\|CAG62784.1\| unnamed protein product [Candida glabrata]	474.0	[0..42]	[537..149]

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Predicted Domain #1

Region A:
Residues: [1-124]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTDTPRILIT PSPLSDISTT INKPNVHPSM SLLKALPECR LVVKSKGDKN NANVVEFPLD  60
   61 RHKQLLIAGK VYHDYKFKPR KSIFDRVTDP NYFAKSEFRG FYVLFWLSMA AWVLQLYARS 120
  121 YWQR

[Run NCBI BLAST on this sequence.]

Detection Method:	FFAS03
Confidence:	0.985
Match:	1qd7B
Description:	30S subunit
Matching Structure (courtesy of the PDB):

Predicted Domain #2

Region A:
Residues: [125-250]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DTLLGLPLAR QVFRQFFVLF SSDFLMICLS FFSYGLQVCI EKNMIRWANL GYTIQTLWQG  60
   61 FYMVLAVYWV KHRDFPIVQC VFFTLHCAVL IMKQFSYSHH MGYISEIRIL HNEYEKLLKF 120
  121 VRECLN

[Run NCBI BLAST on this sequence.]

Detection Method:

MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3

Region A:
Residues: [251-329]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 STEKDEKYTF ELTFPNKPAE TISTLQAEEI VALTAKYLSR QMRSEVGNVV YPDNINFFNY  60
   61 VDYLLVPSLV YSMEFPRVA

[Run NCBI BLAST on this sequence.]

Detection Method:

MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4

Region A:
Residues: [330-425]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 HFRWHYMAFK AGSTFGLLAL TLALVDWYFV PSAVAVKDLD FIGKLRIAPL LMNKIMFPAI  60
   61 ILYLIMFYLI FDCILNAFAE ITKFADRGFY GAWWNT

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #5

Region A:
Residues: [426-537]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VTWDEFSREW NKPVHVFLMR HVYHSSISGF KLKKSHAVLL TFLISALVHE FVMLLATGKF  60
   61 RCYILTFQLL QIPLYDLQQM FAFKKRDILG NVFFWIGMFT GPSFLCILYI VF

[Run NCBI BLAST on this sequence.]

Detection Method:

MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits