YRC Public Data Repository - Protein Structure Prediction

Protein:	SPAC13C5.05c
Organism:	Schizosaccharomyces pombe
Length:	518 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPAC13C5.05c.

Description	E-value	Query Range	Subject Range
gi\|31543474, gi\|... - gi\|31543474\|ref\|NP_082628.2\| phosphoglucomutase 3 [Mus musculus], gi\|26331496\|dbj\|BAC29478.1\| unname...	327.0	[0..2]	[517..16]
gi\|109071858, gi... - gi\|109071860\|ref\|XP_001083518.1\| PREDICTED: phosphoglucomutase 3 isoform 3 [Macaca mulatta], gi\|1090...	323.0	[0..2]	[517..16]
PGM3 - phosphoglucomutase 3	322.0	[0..2]	[517..16]
gi\|114608269, gi... - gi\|114608269\|ref\|XP_001149456.1\| PREDICTED: phosphoglucomutase 3 isoform 3 [Pan troglodytes], gi\|114...	320.0	[0..2]	[517..16]
gi\|109485096, gi... - gi\|187469167\|gb\|AAI66838.1\| Pgm3 protein [Rattus norvegicus], gi\|149018988\|gb\|EDL77629.1\| phosphoglu...	317.0	[0..2]	[517..16]

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Predicted Domain #1

Region A:
Residues: [1-518]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTKNKKYSYG TAGFRTKASD LEAAVYSSGV AAALRSMELK GKTIGVMITA SHNPVEDNGV  60
   61 KIIDADGGML AMEWEDKCTQ LANAPSKAEF DFLIKQFLTP TTCQPKVIIG YDTRPSSPRL 120
  121 AELLKVCLDE MSASYIDYGY ITTPQLHWLV RLINKSTAAS FLEEGPPITE YYDTLTSAFS 180
  181 KIDPSMQDSP TVSRVVVDCA NGVGSQPLKT VAGLVKDSLS IELVNTDVRA SELLNNGCGA 240
  241 DFVKTKQSPP LALEGKIKPN QLYASIDGDA DRLIFYYINQ NRKFHLLDGD KISTALVGYL 300
  301 NILVKKSGMP FSLGVVQTAY ANGASTEYLQ DLGITTVFTP TGVKHLHKAA KEFDIGVYFE 360
  361 ANGHGTVLFS DKALANLAHP FFTPSPVQAA AIEQLQSYSV LINQAIGDAI SDLLATISVL 420
  421 NALHWDASAW SNTYKDLPNK LAKVKVSDRT IYKSTDAERR LVSPDGLQEK IDALVAKYEK 480
  481 GRSFVRASGT EDVVRVYAEA STKQAADELC EKVCQLVL

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	85.045757
Match:	2dkaA
Description:	No description for 2dkaA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits