YRC Public Data Repository - Protein Structure Prediction

Protein:	anc1
Organism:	Schizosaccharomyces pombe
Length:	322 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for anc1.

Description	E-value	Query Range	Subject Range
gi\|74006830 - gi\|74006830\|ref\|XP_537947.2\| PREDICTED: similar to ADP/ATP translocase 3 (Adenine nucleotide translo...	293.0	[0..22]	[317..175]
gi\|114597246 - gi\|114597246\|ref\|XP_517556.2\| PREDICTED: solute carrier family 25 (mitochondrial carrier; adenine nu...	293.0	[0..3]	[316..186]
gi\|125551734 - gi\|125551734\|gb\|EAY97443.1\| hypothetical protein OsI_19373 [Oryza sativa Indica Group] gi\|125593659, gi... - gi\|222631025\|gb\|EEE63157.1\| hypothetical protein OsJ_17966 [Oryza sativa Japonica Group], gi\|2156926...	291.0	[0..6]	[322..59]
gi\|68366574 - gi\|68366574\|ref\|XP_694733.1\| PREDICTED: similar to ADP,ATP carrier protein 2 (ADP/ATP translocase 2)...	290.0	[0..26]	[322..21]
ADT_NEUCR - ADP,ATP carrier protein OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257... ADT_NEUCR - ADP,ATP carrier protein OS=Neurospora crassa GN=acp PE=3 SV=1	289.0	[0..23]	[322..9]
ADT1_MAIZE - ADP,ATP carrier protein 1, mitochondrial OS=Zea mays GN=ANT1 PE=2 SV=3	288.0	[0..11]	[322..71]
gi\|44983829 - gi\|44983829\|gb\|AAS52865.1\| AER184Wp [Ashbya gossypii ATCC 10895] gi\|45190787, gi\|... - gi\|45190787\|ref\|NP_985041.1\| AER184Wp [Ashbya gossypii ATCC 10895], gi\|44983829\|gb\|AAS52865.1\| AER18...	287.0	[0..19]	[322..1]
gi\|46123287, gi\|... - gi\|46123287\|ref\|XP_386197.1\| ADT_NEUCR ADP,ATP CARRIER PROTEIN (ADP/ATP TRANSLOCASE) (ADENINE NUCLEO...	286.0	[0..14]	[322..2]

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Predicted Domain #1

Region A:
Residues: [1-322]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATSSAAAAA STPVNANTIT ETKNSTFFFD FMMGGVSAAV SKTAAAPIER VKLLIQNQDE  60
   61 MIRAGRLSHR YKGIGECFKR TAAEEGVISL WRGNTANVLR YFPTQALNFA FKDKFKKMFG 120
  121 YKKERDGYAK WFAGNLASGG AAGAASLLFV YSLDYARTRL ANDAKSAKKG GERQFNGLVD 180
  181 VYRKTYRSDG LRGLYRGFGP SVVGIVVYRG LYFGMYDTLK PVVLVGPLEG NFLASFLLGW 240
  241 AVTTGSGVAS YPLDTIRRRM MMTSGEAVKY SSSFECGRQI LAKEGARSFF KGAGANILRG 300
  301 VAGAGVLSIY DQVQLLMFGK KF

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	76.0
Match:	1okcA
Description:	structure of mitochondrial ADP/ATP carrier in complex with carboxyatractyloside
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits