YRC Public Data Repository - Protein Structure Prediction

Protein:	adh1
Organism:	Schizosaccharomyces pombe
Length:	350 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for adh1.

Description	E-value	Query Range	Subject Range
gi\|171023 - gi\|171023\|gb\|AAA34409.1\| alcohol dehydrogenase III [Saccharomyces cerevisiae]	358.0	[0..2]	[350..29]
gi\|7248741 - gi\|7248741\|gb\|AAF43645.1\|AF218309_1 alcohol dehydrogenase isozyme 3; Adh3 [Saccharomyces kluyveri]	358.0	[0..2]	[350..27]
gi\|37787879 - gi\|37787879\|gb\|AAP51052.1\| alcohol dehydrogenase 3 [Saccharomyces pastorianus]	357.0	[0..2]	[350..29]
gi\|50290683, gi\|... - gi\|50290683\|ref\|XP_447774.1\| unnamed protein product [Candida glabrata], gi\|49527085\|emb\|CAG60721.1\|... gi\|49527085 - gi\|49527085\|emb\|CAG60721.1\| unnamed protein product [Candida glabrata]	356.0	[0..1]	[350..25]
gi\|37787787 - gi\|37787787\|gb\|AAP51044.1\| alcohol dehydrogenase 3 [Saccharomyces bayanus]	354.0	[0..2]	[350..29]
ADH3_KLULA - Alcohol dehydrogenase 3, mitochondrial OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70... ADH3_KLULA - Alcohol dehydrogenase 3, mitochondrial OS=Kluyveromyces lactis GN=ADH3 PE=3 SV=2	353.0	[0..2]	[349..28]
gi\|238878745 - gi\|238878745\|gb\|EEQ42383.1\| alcohol dehydrogenase II [Candida albicans WO-1] ADH2_CANAL - Alcohol dehydrogenase 2 OS=Candida albicans GN=ADH2 PE=1 SV=1 ADH2_CANAL - Alcohol dehydrogenase 2 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=ADH2 PE=3 SV=1	353.0	[0..1]	[347..1]

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Predicted Domain #1

Region A:
Residues: [1-350]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTIPDKQLAA VFHTHGGPEN VKFEEVPVAE PGQDEVLVNI KYTGVCHTDL HALQGDWPLP  60
   61 AKMPLIGGHE GAGVVVKVGA GVTRLKIGDR VGVKWMNSSC GNCEYCMKAE ETICPHIQLS 120
  121 GYTVDGTFQH YCIANATHAT IIPESVPLEV AAPIMCAGIT CYRALKESKV GPGEWICIPG 180
  181 AGGGLGHLAV QYAKAMAMRV VAIDTGDDKA ELVKSFGAEV FLDFKKEADM IEAVKAATNG 240
  241 GAHGTLVLST SPKSYEQAAG FARPGSTMVT VSMPAGAKLG ADIFWLTVKM LKICGSHVGN 300
  301 RIDSIEALEY VSRGLVKPYY KVQPFSTLPD VYRLMHENKI AGRIVLDLSK

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	92.69897
Match:	2hcyA
Description:	No description for 2hcyA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits