YRC Public Data Repository - Protein Structure Prediction

Protein:	SPAC4H3.09
Organism:	Schizosaccharomyces pombe
Length:	112 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPAC4H3.09.

Description	E-value	Query Range	Subject Range
gi\|228655654, gi... - gi\|229127889\|ref\|ZP_04256875.1\| Peptide synthetase [Bacillus cereus BDRD-Cer4], gi\|228655654\|gb\|EEL1... gi\|30020584, gi\|... - gi\|30020584\|ref\|NP_832215.1\| peptide synthetase [Bacillus cereus ATCC 14579], gi\|29896135\|gb\|AAP0941...	121.0	[0..4]	[112..1992]
gi\|163943331, gi... - gi\|89203969\|ref\|ZP_01182548.1\| Amino acid adenylation [Bacillus weihenstephanensis KBAB4], gi\|891581...	119.0	[0..4]	[111..943]
gi\|67921836, gi\|... - gi\|67921836\|ref\|ZP_00515353.1\| Amino acid adenylation [Crocosphaera watsonii WH 8501], gi\|67856428\|g...	119.0	[0..4]	[110..923]
gi\|75701558, gi\|... - gi\|75907833\|ref\|YP_322129.1\| amino acid adenylation [Anabaena variabilis ATCC 29413], gi\|75701558\|gb...	117.0	[0..4]	[111..2105]
gi\|6563399 - gi\|6563399\|gb\|AAF17280.1\| NosC [Nostoc sp. GSV224]	117.0	[0..4]	[111..3198]
gi\|115367344, gi... - gi\|115375634\|ref\|ZP_01462890.1\| hypothetical protein STIAU_0869 [Stigmatella aurantiaca DW4/3-1], gi...	116.0	[0..4]	[111..1532]
LGRC_BREPA - Linear gramicidin synthase subunit C OS=Brevibacillus parabrevis GN=lgrC PE=3 SV=1 gi\|42820780 - gi\|42820780\|emb\|CAD92851.1\| nonribosomal peptide synthetase [Brevibacillus brevis]	116.0	[0..4]	[112..3529]
gi\|9715733 - gi\|9715733\|emb\|CAC01603.1\| peptide synthetase [Anabaena circinalis 90]	116.0	[0..4]	[105..2136]
GRSB_ANEMI - Gramicidin S synthase 2 OS=Aneurinibacillus migulanus GN=grsB PE=3 SV=2	115.0	[0..4]	[111..1979]

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Predicted Domain #1

Region A:
Residues: [1-112]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSRFSSQLR FISAVRPVIP KFQPLRFYSV ARPDAEKRIL KVVSSFDKIQ DPKKVTPTST  60
   61 FANDLGLDSL DAVEVVMAIE EEFSIQIPDK DADEITSVGD AISYITKNPE AK

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	17.69897
Match:	2ehsA
Description:	No description for 2ehsA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits