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View Structure Prediction Details

Protein: FBpp0305384, FBp...
Organism: Drosophila melanogaster
Length: 730 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBpp0305384, FBp....

Description E-value Query
Range
Subject
Range
gi|39592304, gi|... - gi|39592304|emb|CAE75525.1| Hypothetical protein CBG23547 [Caenorhabditis briggsae], gi|187020927|em...
gi|157762282 - gi|157762282|ref|XP_001673483.1| Hypothetical protein CBG23547 [Caenorhabditis briggsae AF16]
309.0 [0..2] [729..784]

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Predicted Domain #1
Region A:
Residues: [1-250]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSPPNCLLAV LALTVFIGAN NALPITSRPI EGNVQRMVWE DWVNLDPEQR NLTKEKKITA  60
   61 KSIFTLPFRH CPQGHTLFNQ LCIPQSNIDP TDLVKQELIL AGGSNGSPPP PPIGDYDYGD 120
  121 DEESEEIVYD LSVIPTAMQD GLPPSVGTGD QALPSEDAPL KFNIFEKKFP TGTGEHEEMP 180
  181 LPPDMAAATY AKNISTTPET STSITPTSTT TFAVPSVPSG EASNRIPGGV DLLAAPSDAF 240
  241 STSTTLSMPT 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [251-379]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SNTTTTSNKD IGQVESIVLP ADQEHDGLVH LVTSSLSDND SDDSSTTLNG FNAEADLAQL  60
   61 LKVDAFWPVY DGSIELLPPL FSHRKVAPPL SADQDVKTKH AVDAAEKVGA ELEEEVGEEE 120
  121 VTATDILPS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [380-566]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EEDEYTTETA TTTGDTTVAE ASMDTSTATS TSGQSSPHPP EEPEIDEREN RLVLIKSKVQ  60
   61 PVQLTTTTSA TATTAADVAN SSSSTDRFHY QHFVEDESST TTATPEPSSS TPGDPIEQSD 120
  121 MPASDNDNLM TNTIGGRGDD DDDGGHKATS EIHVQQELRL INELVKGKQR QQHQPQKQQL 180
  181 EPTSTEI

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [567-730]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TSALTSTSTE DATTTTTTTT AYTNWSKVMP QLGQSTSETA ATTETVATSG QVNEISLTAT  60
   61 SASTEVKHFS ITNRSYRNSK IIREDRLTVE PEGIVESAAS TESAGTAATT PNSSSNPDGY 120
  121 TPLWWLPSIG WRLDRHLDGN GEDQSLLLRF FSTFRGSNTA ATTR

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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