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View Structure Prediction Details

Protein: Cp110-PA, FBpp03...
Organism: Drosophila melanogaster
Length: 549 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Cp110-PA, FBpp03....

Description E-value Query
Range
Subject
Range
Cp110-PB, FBpp03... - This gene is referred to in FlyBase by the symbol Dmel\Cp110 (CG14617, FBgn0031191). It is a protein...
357.0 [0..1] [546..1]

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Predicted Domain #1
Region A:
Residues: [1-199]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDATWAMEQL LSAVEMGGSH SEATTPTATT TISIWSAPSE GSGSSSMDPV SFRFHLDGQP  60
   61 ILPPLMTSAK KREVQLARQM AEALEKRYRL ARHSAGSDMA SRRSVSQLQQ TETLIYDSTR 120
  121 GQARPQTLVF GKQLPTIQVD PPTPQPFVKS IENTSPRRHN RITDRILQFE QSGLGKLLPK 180
  181 VPDKCILRTS PAVAEDQQD

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [200-295]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QDTKDTTARE LGSPLAEPAN FQRSRSFTLE EPSQVLVEHM EREALAVKPS QSLANFEKQT  60
   61 IESQAKRVNR SARSISSKIS HNSYNSNSSA ATKSTI

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [296-444]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ATKTTTAGSS CSRRDREVER IIERALDEHG ALEASRKAGV RNYLRGHRER MNQLVIHQEK  60
   61 ERRRMQAEFD HQQRQLIEEL CAEIDVSSAT ENPDSLISQS TSTGDLQRFS PSPTLPSFSE 120
  121 DIEDFPTMED KCQIAGPSSA RKRLFSPKP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [445-549]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SKDSEPQLLS APSTPRSLPL RNSSLTNSRR SVQVVRRRSQ SVGGSLVKTI TAADREVKKS  60
   61 PAKPGGGAGR PKSSPGKNSS IIAKRGSAPP KSASPTKRLG NRKKP

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


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Created and Maintained by: Michael Riffle