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View Structure Prediction Details

Protein: FBpp0309677, CG1...
Organism: Drosophila melanogaster
Length: 373 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBpp0309677, CG1....

Description E-value Query
Range
Subject
Range
gi|54643607, gi|... - gi|54643607|gb|EAL32350.1| GA13121-PA [Drosophila pseudoobscura], gi|125983056|ref|XP_001355293.1| G...
180.0 [0..4] [373..2]

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Predicted Domain #1
Region A:
Residues: [1-153]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLGKRTGSRH IAVVLLMCLF WYVISSSNNV IGKMVLNEFP FPMTVTLVQL CSITLYSGPF  60
   61 FNLWRIRKYQ DIPRPYYYRL IVPLALGKLL ASVTSHISLW KVPVSYAHTV KATMPLFTVV 120
  121 LTRVFFGEKQ PTLVYLSLLP IITGVGIATV TEI

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [154-373]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SFDMMGLISA LISTMGFSMQ NIFSKKVLKD TNIHHLRLLH LLGKLSLFIF LPLWLYMDSF  60
   61 AVFRHTAIKN LDYRVIALLF ADGVLNWLQN IIAFSVLSLV TPLTYAVASA SKRIFVIAVS 120
  121 LLILGNPVTW VNCVGMTLAI VGVLCYNRAK QLTRGREQPT LPLSQTSYVK YSPLEQQADP 180
  181 YYRGSVNGKL SNGLHRTPGN SLLANGSGMP SGTATRLLFV 

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.97
Match: 2i68A
Description: No description for 2i68A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle