| Protein: | DIP1-PD |
| Organism: | Drosophila melanogaster |
| Length: | 410 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DIP1-PD.
| Description | E-value | Query Range |
Subject Range |
|
|
310.0 | [0..1] | [410..1] |
|
Region A: Residues: [1-156] |
1 11 21 31 41 51
| | | | | |
1 MKRNRRAFAG NNKPFVFGGI YNPNATVKPL IQMPLQAANV QEQQSSPVAL YPTSASPVAV 60
61 QSPQDAFLAV QSPGAPAPVQ LANSSDQQNN PDADAIASKL PMPVIIKEEP ISVNDEPSVD 120
121 NIEDNTSAST SASGIGGKIP FKKIFQKRKK SSERTR
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [157-243] |
1 11 21 31 41 51
| | | | | |
1 DKKLRQNRQL RKSMLPKNAL MALNEVKGVT ISDFTIDSNT DGGFTAVVTV NSNQYEGKGT 60
61 SKMTAKNAAC EKAWRDFIIA KMTPKPP
|
| Detection Method: | |
| Confidence: | 6.09691 |
| Match: | 1whqA |
| Description: | Solution structure of the N-terminal dsRBD from hypothetical protein BAB28848 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.94193673826237 | bayes_pls_golite062009 |
| nucleic acid binding | 1.04630961873875 | bayes_pls_golite062009 |
| RNA binding | 0.41703783699663 | bayes_pls_golite062009 |
| protein binding | 0.32114973384806 | bayes_pls_golite062009 |
|
Region A: Residues: [244-319] |
1 11 21 31 41 51
| | | | | |
1 RIHQVEMGSE PMDINEDEAD APDDDLPMLN LASFAIYKLF AEWEREGYVV PEMHPSANAA 60
61 QQAGGDAGTP VPPVPK
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [320-410] |
1 11 21 31 41 51
| | | | | |
1 EPKKPPVRTE LPSGWETMHP ATILCIMRPG LNYVDYGSSG DKTNGMQHLG IMVDNQEFHA 60
61 NGRSKKIARR NVAVKVCNSL FGTNFTYSDT T
|
| Detection Method: | |
| Confidence: | 16.522879 |
| Match: | 1rc7A |
| Description: | Crystal structure of RNase III Mutant E110K from Aquifex Aeolicus complexed with ds-RNA at 2.15 Angstrom Resolution |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.94193673826237 | bayes_pls_golite062009 |
| nucleic acid binding | 1.04630961873875 | bayes_pls_golite062009 |
| RNA binding | 0.41703783699663 | bayes_pls_golite062009 |
| protein binding | 0.32114973384806 | bayes_pls_golite062009 |
