| Protein: | DIP1-PC |
| Organism: | Drosophila melanogaster |
| Length: | 395 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DIP1-PC.
| Description | E-value | Query Range |
Subject Range |
|
|
275.0 | [0..1] | [395..1] |
|
Region A: Residues: [1-138] |
1 11 21 31 41 51
| | | | | |
1 MKRNRRAFAG NNKPFVFGGI YAANVQEQQS SPVALYPTSA SPVAVQSPQD AFLAVQSPGA 60
61 PAPVQLANSS DQQNNPDADA IASKLPMPVI IKEEPISVND EPSVDNIEDN TSASTSASGI 120
121 GGKIPFKKIF QKRKKSSE
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [139-257] |
1 11 21 31 41 51
| | | | | |
1 RTRDKKLRQN RQLRKSMLPK NALMALNEVK GVTISDFTID SNTDGGFTAV VTVNSNQYEG 60
61 KGTSKMTAKN AACEKAWRDF IIAKMTPKPP RIHQVEMGSE PMDINEDEAD APDDDLPML
|
| Detection Method: | |
| Confidence: | 7.0 |
| Match: | 1whqA |
| Description: | Solution structure of the N-terminal dsRBD from hypothetical protein BAB28848 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.94193673826237 | bayes_pls_golite062009 |
| nucleic acid binding | 1.04630961873875 | bayes_pls_golite062009 |
| RNA binding | 0.41703783699663 | bayes_pls_golite062009 |
| protein binding | 0.32114973384806 | bayes_pls_golite062009 |
|
Region A: Residues: [258-395] |
1 11 21 31 41 51
| | | | | |
1 NLASFAIYKL FAEWEREGYV VPEMHPSANA AQQAGGDAGT PVPPVPKEPK KPPVRTELPS 60
61 GWETMHPATI LCIMRPGLNY VDYGSSGDKT NGMQHLGIMV DNQEFHANGR SKKIARRNVA 120
121 VKVCNSLFGT NFTYSDTT
|
| Detection Method: | |
| Confidence: | 15.522879 |
| Match: | 1o0wA |
| Description: | RNase III endonuclease catalytic domain; RNase III, C-terminal domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.94193673826237 | bayes_pls_golite062009 |
| nucleic acid binding | 1.04630961873875 | bayes_pls_golite062009 |
| RNA binding | 0.41703783699663 | bayes_pls_golite062009 |
| protein binding | 0.32114973384806 | bayes_pls_golite062009 |
