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View Structure Prediction Details

Protein: r-cup-PA
Organism: Drosophila melanogaster
Length: 594 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for r-cup-PA.

Description E-value Query
Range
Subject
Range
gi|33589654 - gi|33589654|gb|AAQ22593.1| AT11375p [Drosophila melanogaster]
414.0 [0..1] [594..1]

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Predicted Domain #1
Region A:
Residues: [1-594]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKDSSQSAPA GLLVANLKSW ETFDWPTEQQ RWIYRSWGQY FARMRKNTFA QKYFDKCITE  60
   61 NESTDHKALY LRSKFKRSVA LTQDALEDSL RAMEVRQAWD ANVSMELGDA LYDLNRFEEN 120
  121 KSLLHDNVRR HAGTALKSFE NRLVVVDENL KDCTGFSLAN FFMEHSAQLP GFYAHQQEEL 180
  181 RRADRRPLWK ILKERKECDV QSRIDRKEVM LSPLERERRR RKTKIFYQNY LGRSWTDFFF 240
  241 LKTLRRHPNC LLDNHFGSSA DRTKYLEYAF QRLKTFTRML QARRPMYKEY FHRNPQIEAR 300
  301 MRDANLFRIQ YQTRRNMVSI LRTIKVLRGR NDIKRLRKFV EEVMGSYVVI KTNRLMPWKA 360
  361 EFMNEVYNNL ALSLCEGYRL PPTRVTPYDK SAMCQLLNIP VAKPLEHTEL IFGDRSTYSY 420
  421 AGADKQSTDR LADQNQIEYL EKRLLFARLP IERSYLLHEL ADRHMQKNHF VQSLSYAQKA 480
  481 IEEARVCNSL IWEFLSTMLM AKSHAVLHKY ERQTEVLNSA YELAAQLKSP QLCTFIELCR 540
  541 MLNKDYITLR KMSQLVTTKR LRTKISNRSS FLSSPNCSPN FSEFKKEEYG HLAA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 30.0
Match: 2gw1A
Description: No description for 2gw1A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle