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View Structure Prediction Details

Protein: FBpp0297663, obs...
Organism: Drosophila melanogaster
Length: 237 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBpp0297663, obs....

Description E-value Query
Range
Subject
Range
obst-B-PA - The gene obstructor-B is referred to in FlyBase by the symbol Dmel\obst-B (CG4778, FBgn0027600). It ...
gi|220943728 - gi|220943728|gb|ACL84407.1| obst-B-PA [synthetic construct]
141.0 [0..14] [237..75]

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Predicted Domain #1
Region A:
Residues: [1-80]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLFLCAIAV TLCVATTVSA ANFECPKPNG QFADEVQCDK FYVCDDGVAK AKLCPDGLVF  60
   61 DPLNRKFNKC DQPFNVDCED 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 8.0
Match: 1wawA
Description: Specificity and affnity of natural product cyclopentapeptide inhibitor Argadin against human chitinase
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [81-237]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RTELQEPKSS KYCPRKNGFF AHPDPAVCNI FYNCIEGDAL ETKCTVGLHF DEYSGTCVWP  60
   61 DTAKREGCNP EQRTSETGFV CPKDQPKTDD RGQVVTHPKY PHPTDCQKFY VCLNGEDPRD 120
  121 LGCQLGEVYN DATEMCDAPE NVPGCEDWYK DVDDKKD

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.23
Match: 1z1yA
Description: Crystal structure of Methylated Pvs25, an ookinete protein from Plasmodium vivax
Matching Structure (courtesy of the PDB):

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