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View Structure Prediction Details

Protein: Or19a-PB
Organism: Drosophila melanogaster
Length: 387 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Or19a-PB.

Description E-value Query
Range
Subject
Range
gi|54643260|gb|E... - GA17168-PA [Drosophila pseudoobscura], Or19a [Drosophila pseudoobscura pseudoobscura]
gi|54643260, gi|... - gi|54643260|gb|EAL32004.1| Or19a [Drosophila pseudoobscura pseudoobscura], gi|125981889|ref|XP_00135...
184.0 [0..3] [386..1]

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Predicted Domain #1
Region A:
Residues: [1-221]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDISKVDSTR ALVNHWRIFR IMGIHPPGKR TFWGRHYTAY SMVWNVTFHI CIWVSFSVNL  60
   61 LQSNSLETFC ESLCVTMPHT LYMLKLINVR RMRGQMISSH WLLRLLDKRL GCDDERQIIM 120
  121 AGIERAEFIF RTIFRGLACT VVLGIIYISA SSEPTLMYPT WIPWNWRDST SAYLATAMLH 180
  181 TTALMANATL VLNLSSYPGT YLILVSVHTK ALALRVSKLG Y

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [222-387]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GAPLPAVRMQ AILVGYIHDH QIILRLFKSL ERSLSMTCFL QFFSTACAQC TICYFLLFGN  60
   61 VGIMRFMNML FLLVILTTET LLLCYTAELP CKEGESLLTA VYSCNWLSQS VNFRRLLLLM 120
  121 LARCQIPMIL VSGVIVPISM KTFTVMIKGA YTMLTLLNEI RKTSLE

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle