| Protein: | Bap-PA |
| Organism: | Drosophila melanogaster |
| Length: | 921 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Bap-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
660.0 | [0..1] | [920..1] |
|
Region A: Residues: [1-595] |
1 11 21 31 41 51
| | | | | |
1 MTDSKYFTTT KKGEIFELKS ELNNDKKEKK KEAVKKVIAS MTVGKDVSAL FPDVVNCMQT 60
61 DNLELKKLVY LYLMNYAKSQ PDMAIMAVNT FVKDCEDSNP LIRALAVRTM GCIRVDKITE 120
121 YLCEPLRKCL KDEDPYVRKT AAVCVAKLYD ISATMVEDQG FLDQLKDLLS DSNPMVVANA 180
181 VAALSEINEA SQSGQPLVEM NSVTINKLLT ALNECTEWGQ VFILDSLANY SPKDEREAQS 240
241 ICERITPRLA HANAAVVLSA VKVLMKLLEM LSSDSDFCAT LTKKLAPPLV TLLSSEPEVQ 300
301 YVALRNINLI VQKRPDILKH EMKVFFVKYN DPIYVKLEKL DIMIRLANQS NIAQVLSELK 360
361 EYATEVDVDF VRKAVRAIGR CAIKVEPSAE RCVSTLLDLI QTKVNYVVQE AIVVIKDIFR 420
421 KYPNKYESII STLCENLDTL DEPEARASMV WIIGEYAERI DNADELLDSF LEGFQDENAQ 480
481 VQLQLLTAVV KLFLKRPSDT QELVQHVLSL ATQDSDNPDL RDRGFIYWRL LSTDPAAAKE 540
541 VVLADKPLIS EETDLLEPTL LDELICHISS LASVYHKPPT AFVEGRGAGV RKSLP
|
| Detection Method: |  |
| Confidence: | 116.0 |
| Match: | 1w63B |
| Description: | AP1 clathrin adaptor core |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [596-676] |
1 11 21 31 41 51
| | | | | |
1 NRAAGSAAGA EQAENAAGSE AMVIPNQESL IGDLLSMDIN APAMPSAPAA TSNVDLLGGG 60
61 LDILLGGPPA EAAPGGATSL L
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [677-921] |
1 11 21 31 41 51
| | | | | |
1 GDIFGLGGAT LSVGVQIPKV TWLPAEKGKG LEIQGTFSRR NGEVFMDMTL TNKAMQPMTN 60
61 FAIQLNKNSF GLVPASPMQA APLPPNQSIE VSMALGTNGP IQRMEPLNNL QVAVKNNIDI 120
121 FYFACLVHGN VLFAEDGQLD KRVFLNTWKE IPAANELQYT LSGVIGTTDG IASKMTTNNI 180
181 FTIAKRNVEG QDMLYQSLKL TNNIWVLLEL KLQPGNPEAT LSLKSRSVEV ANIIFAAYEA 240
241 IIRSP
|
| Detection Method: | |
| Confidence: | 55.30103 |
| Match: | 1e42A |
| Description: | Beta2-adaptin AP2 ear domain, N-terminal subdomain; Beta2-adaptin AP2, C-terminal subdomain |
Matching Structure (courtesy of the PDB): |
|
