YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: CG14232-PA, FBpp...
Organism: Drosophila melanogaster
Length: 480 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG14232-PA, FBpp....

Description E-value Query
Range
Subject
Range
gi|55241559, gi|... - gi|58383916|ref|XP_312883.2| ENSANGP00000014744 [Anopheles gambiae str. PEST], gi|55241559|gb|EAA083...
505.0 [0..26] [480..1]

Back

Predicted Domain #1
Region A:
Residues: [1-120]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASGTSGTSS SETAQSTDMA PSSAEKWGFP LIELYRLAFT FYKRNSGKAI HLSYEDNLKL  60
   61 IAFKQQAALG PFNTSRAPAL GVLDVIGRDR QQHWQLLGEI TREQAMEGFV DLLDTMCSAF 120
  121 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 24.30103
Match: 2copA
Description: Solution structure of RSGI RUH-040, an ACBP domain from human cDNA
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [121-301]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RPYIEAVRQD RDETLRKELR LMEEKKEARE RQENAQQELL EEGYKEELQR RQLQDALNKQ  60
   61 TYQQFKLYAE KQFPGNPEQQ AVLIHQLQRE HYHQYMQQLH LQNQNQNQNQ NTEDKGHQEA 120
  121 EHVPGNNNNS STDLPNAMEG LKLGEVETQQ HQQLAEQQDG HVEQTLEGVG QEQHGEEEYD 180
  181 D

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 4.69897
Match: 2i1jA
Description: No description for 2i1jA was found.

Predicted Domain #3
Region A:
Residues: [302-480]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 YVMICPAKIW TRPDIEQFKT EVSAGDGDGV ITIGHGDTVT VRVPTNMNGK CIFWEFATDS  60
   61 YDIGFGIYFE WAKPVTNEVT VHVSDSDEDE DCVDEDYLST TEDLESGSLS QERGAVNNPT 120
  121 AAPKAPISII VPIYRRECYN EVYVGSHSYP GEGVYLLKFD NSYSIWRNKT LYYRVYYER

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 3.1
Match: 1o6uA
Description: The Crystal Structure of Human Supernatant Protein Factor
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle