| Protein: | car-PA, car-PB |
| Organism: | Drosophila melanogaster |
| Length: | 617 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for car-PA, car-PB.
| Description | E-value | Query Range |
Subject Range |
|
|
498.0 | [0..1] | [616..1] |
|
Region A: Residues: [1-617] |
1 11 21 31 41 51
| | | | | |
1 MFPHLKGHGQ RVNLQLLQEA ACRELLQQLD RIEGSKVIVL DETMIGPLDL VTRPKLFADR 60
61 GIRLLALKPE LHLPREVANV VYVMRPRVAL MEQLAAHVKA GGRAAAGRQY HILFAPRRSC 120
121 LCVSQLEVSG VLGSFGNIEE LAWNYLPLDV DLVSMEMPNA FRDVSVDGDT SSLYQAAVGL 180
181 VQLQRLYGRI PKIYGKGEFA HRVWEHAKQL GRDERTLYNG DKGVVDQLIL LDRSIDLLSP 240
241 LATQLTYEGL IDEFYGIRQN KLTLPAENFP SDGALPGGGG SGPRVEESQS LLGDTEKKTI 300
301 LLHSGEQLYA ELRNKHFNEV TKLLARKARE IHVQMHATSQ DKSVQEIKSF VENLLPQLMA 360
361 QKKATSEHTA IAGLLHEQVN AVRFADDLAA EQEFMVCADI DKPSAYIEDL IACRVELNRV 420
421 LRLICMQCHA ASGFKEKLLN HYKRELVHVY GLEVLLTISN LEKSGLLHLQ TESRAYSVLR 480
481 KTLHLTVDDN VEIEPKDISY VHSFYAPLTA RIVEHSLKPL GWQTLKSQIN NLPGPTFEDF 540
541 QAQLVGIGGR HTVTTVSEGS LLNVPRVVLV CFVGGCTFAE IAALRFLAAQ EDNNVEFLIA 600
601 TTKVVNKHSF LDSLMSS
|
| Detection Method: |  |
| Confidence: | 137.0 |
| Match: | 1dn1A |
| Description: | Neuronal Sec1, NSec1 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| SNARE binding | 3.42828022195984 | bayes_pls_golite062009 |
| binding | 2.7837022903231 | bayes_pls_golite062009 |
| syntaxin binding | 2.11416428645287 | bayes_pls_golite062009 |
| protein binding | 1.7224010512877 | bayes_pls_golite062009 |
| syntaxin-1 binding | 0.269372794919901 | bayes_pls_golite062009 |
