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View Structure Prediction Details

Protein: CG14196-PA
Organism: Drosophila melanogaster
Length: 600 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG14196-PA.

Description E-value Query
Range
Subject
Range
gi|157128818, gi... - gi|157128818|ref|XP_001655208.1| monocarboxylate transporter [Aedes aegypti], gi|108882163|gb|EAT463...
256.0 [0..3] [600..63]

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Predicted Domain #1
Region A:
Residues: [1-417]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEKKVYQDTT RPLPRVSRAR YYNKHDKSDL GDDFVAPDAG WAWIVCVAAG VSNLSIYPCL  60
   61 QQFGFLFRER LSDLGMSSSQ ITAIINANPA VSACTGLLNG PMFRRFTFRQ VAMAGSLLIS 120
  121 GSLILTAFCE TFLSYMVAYA LLFGFGMGIS VSASSLAINT YFQKKRRRAA GFSWTITGLG 180
  181 PIFLPHLVTF LLTIYGVQGT TLLFAAISLH SFVCALIYQP VRYHVKPPVE QLADQEQQAE 240
  241 ALCAHCSWQQ KREPGGIFSS QYLCQDDDAQ RPGYEICEPG TPMLSRANDG WYGSRLSLTS 300
  301 GRLRFRTISS SKDLEQTQRL HCPISEEQNH ESDEFLRPNN FRRERVESNL EAKLCCQCSA 360
  361 KREEHNNNRK EKEAEAEEAG MESAPLHDPQ MSFLAKVVTF FDLDLLRDFT FVNLVAG

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 19.0
Match: 1pw4A
Description: Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [418-600]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LTIINFGELN FSILTPFILV DFGFDTPQIT LAMSLLAGLD ITMRFMVPFL TEKIPWDNRV  60
   61 FFLIGVVGIA LGRTVVACTR SYSLILCSFV WIGLCKGVRT IFWPLIIPGY VPLNRLPGAS 120
  121 GLQLLISGLF TLIGGPFVGL VRDRYDYSVT LHCLNMMSFV AATSWSLEAL IRRHRRKQRL 180
  181 VNS

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 3.83
Match: 2gfpA
Description: No description for 2gfpA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle