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View Structure Prediction Details

Protein: CG7349-PA, FBpp0...
Organism: Drosophila melanogaster
Length: 437 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG7349-PA, FBpp0....

Description E-value Query
Range
Subject
Range
gi|19528373 - gi|19528373|gb|AAL90301.1| RE03249p [Drosophila melanogaster]
387.0 [0..1] [437..1]

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Predicted Domain #1
Region A:
Residues: [1-173]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNLLRRQPRL LNKRSTWLFR NYVLANRDVS EPVSRPAAPM STLSIPGPAL AAATPVSAVS  60
   61 LVPRCTHSSL QGGGQGAGGR GLRGSATGGS AAGGIATKRQ YSGGAAPAGA AKPGGAAPAG 120
  121 AAKPGGAAPA GAAKPGGAAA AAAGSAKPGG ASTGKPASGN APATPPPPPP PPP

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.74
Match: 1pk8A
Description: Crystal Structure of Rat Synapsin I C Domain Complexed to Ca.ATP
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [174-437]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 AKSAPPVKAK KPRLKTFEIY RWKPGDQPQT QTYEVDLEQC GAMVLDALIK IKNEMDPTLT  60
   61 FRRSCREGIC GSCAMNINGT NTLACVSSID QNESKCCRIY PLPHLYVVRD LVPDMSQFYD 120
  121 QYRSIQPWLQ RKDLKREAGT AQYLQSVDDR LVLDGLYECI LCACCQTSCP SYWWNSNKYL 180
  181 GPAVLMQAYR WVIDSRDEAT EQRLDFLKDP WKLYRCHSIM NCTNTCPKHL NPARAIIQLK 240
  241 QLLVGLKKKG KPQLKTDALF AGKA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 98.30103
Match: 1zoyB
Description: Crystal Structure of Mitochondrial Respiratory Complex II from porcine heart at 2.4 Angstroms
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle