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View Structure Prediction Details

Protein: CG7288-PA
Organism: Drosophila melanogaster
Length: 494 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG7288-PA.

Description E-value Query
Range
Subject
Range
gi|125982488, gi... - gi|54643414|gb|EAL32158.1| GA20239-PA [Drosophila pseudoobscura], gi|125982488|ref|XP_001355102.1| G...
306.0 [0..18] [494..6]

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Predicted Domain #1
Region A:
Residues: [1-148]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAQTQAPAAK RMKLEKTPAN PVEEDETPSV FNPKYRVCPY LDTINRNLLD FDFEKLCSIS  60
   61 LTRINVYACL VCGKYFQGRG TNTHAYTHSV GEAHHVFLNL HTLRFYCLPD NYEIIDSSLD 120
  121 DIKYVLNPTF TRQEISKLDQ LQPKHSRT

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 15.0
Match: 2g43A
Description: No description for 2g43A was found.

Predicted Domain #2
Region A:
Residues: [149-494]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VDGVLYLPGV VGLNNIKAND YCNVVLHALS HVGPLRDYFL QKQSYAHVVR PPGDSVFTLV  60
   61 QRFGELMRKM WNPRNFKSHV SPHEMLQAVV LWSSKRFQIT EQGDPIDFLS WFLNTLHRAL 120
  121 KGNKHPNSSI LYKIFLGEMK IYTRKMPPVE LDDAAKAQLL ATEEYKDQVE DKNFIYLTCD 180
  181 LPPPPLFTDE FRENIIPQVN LYQLLSKFNG TAEKEYKTYK ANFMKRFEIT RLPQFIILYI 240
  241 KRFTKNTFFL EKNPTIVNFP IKHVDFGDIL GMRQRDKDVK DTKYNLVANI VHDGDPKKGT 300
  301 YRAHILHKAN GQWYEMQDLH VTEILPQMIT LTESYIQIYE RCPNSS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 59.221849
Match: 2ibiA
Description: No description for 2ibiA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle