| Protein: | CG6961-PA |
| Organism: | Drosophila melanogaster |
| Length: | 474 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG6961-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
279.0 | [0..1] | [474..1] |
|
Region A: Residues: [1-178] |
1 11 21 31 41 51
| | | | | |
1 MDIDLSLDEI IERKRGQRGY RPLDRKFNAN FSKPRQLLNK PFFKPSGARG SHSDMPAKRT 60
61 FDARNTIAAK TRAKIADARD LINKSVRDSG IDARQLLLER KKARSAGPIL IDDEEESFEP 120
121 SHRARGKGVH IGQFGHRLSM SNHADGTIQA KWDSDDGVVE LGNHMLSGLR RTFDPRSH
|
| Detection Method: |  |
| Confidence: | 28.0 |
| Match: | 1cvjA |
| Description: | Poly(A)-binding protein |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.950788308762215 | bayes_pls_golite062009 |
| nucleic acid binding | 0.29562225149076 | bayes_pls_golite062009 |
|
Region A: Residues: [179-474] |
1 11 21 31 41 51
| | | | | |
1 KPGKPFAPRR YIDLDNMQDL EDEEISRTLH LGQMKQASPR YSIGGLDLNR GDDVEMSMAP 60
61 LNNKIDNNAF SIYEAARNRI ERPSLTNRLV VGRSNSTKEP LERRHRDTVS TSKLPESLRS 120
121 RLFVGKRDPH ISHGIYANEN RRKAVGGGGG SDSDSGTDSD GDAAAPSKNK RRSPSPLSLR 180
181 TSNTKDGYRL LVSNLHTNVT TADIRELFSD IGPVYDARVV RPGTAEVIYK SLEHAEKAVD 240
241 TYHHRQFDDQ PMHCVLVNPH SSRRSVHKAS SRTVTTNSSG VEVDIDALHS VLFRAR
|
| Detection Method: | |
| Confidence: | 18.39794 |
| Match: | 2ghpA |
| Description: | No description for 2ghpA was found. |
| Term | Confidence | Notes |
| binding | 0.950788308762215 | bayes_pls_golite062009 |
| nucleic acid binding | 0.29562225149076 | bayes_pls_golite062009 |
