| Protein: | CG18259-PA |
| Organism: | Drosophila melanogaster |
| Length: | 474 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG18259-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
313.0 | [0..1] | [474..1] |
|
Region A: Residues: [1-101] |
1 11 21 31 41 51
| | | | | |
1 MDIDLSLDEI IERKRGQRGY RPLDRKFNAN FSKPRQLLNK PFFKPSGARG SHSDTPAKRT 60
61 FDARNTIAAK TRAKIADARD LINKSVRDSG IDARQLLLER K
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [102-180] |
1 11 21 31 41 51
| | | | | |
1 KARSAGPILI DDEEESFEPS HRARGKGVHI GQFGHRLSMS NHADGTIQAK WDSDDGVVEL 60
61 GNHMLSGLRR TFDPRSHKP
|
| Detection Method: | |
| Confidence: | 33.69897 |
| Match: | 1cvjA |
| Description: | Poly(A)-binding protein |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.950788308762215 | bayes_pls_golite062009 |
| nucleic acid binding | 0.29562225149076 | bayes_pls_golite062009 |
|
Region A: Residues: [181-474] |
1 11 21 31 41 51
| | | | | |
1 GKPFAPRRYI DLDNMQDLED EEISRTLHLG QMKQASPRYS IGGLDLNRGD DVEMSMAPLN 60
61 NKIDNNAFSI YEAARNRIER PSLTNRLVVG RSNTTKEPLE RRHRDTASTS KLPESLRSRL 120
121 FVGKRDPHIS HGIYANENRR KAVGGGGARD SDSGTDSDGD AAAPSKNKRR SPSPLSLRTS 180
181 NTKDGYRLLV SNLHTNVTTA DIRELFSDIG PVYDARVVRP GTAEVIYKSL EHAEKAVDTY 240
241 HHRQFDDQPM HCVLVNPHSS RRSVHKASSR TVTTNSSGVE VDIDALHSVL FRVR
|
| Detection Method: | |
| Confidence: | 17.69897 |
| Match: | 2ghpA |
| Description: | No description for 2ghpA was found. |
| Term | Confidence | Notes |
| binding | 0.950788308762215 | bayes_pls_golite062009 |
| nucleic acid binding | 0.29562225149076 | bayes_pls_golite062009 |
