| Protein: | Sh-PE |
| Organism: | Drosophila melanogaster |
| Length: | 655 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Sh-PE.
| Description | E-value | Query Range |
Subject Range |
|
|
406.0 | [0..1] | [655..1] |
|
Region A: Residues: [1-577] |
1 11 21 31 41 51
| | | | | |
1 MAAVAGLYGL GEDRQHRKKQ QQQQQHQKEQ LEQKEEQKKI AERKLQLREQ QLQRNSLDGY 60
61 GSLPKLSSQD EEGGAGHGFG GGPQHFEPIP HDHDFCERVV INVSGLRFET QLRTLNQFPD 120
121 TLLGDPARRL RYFDPLRNEY FFDRSRPSFD AILYYYQSGG RLRRPVNVPL DVFSEEIKFY 180
181 ELGDQAINKF REDEGFIKEE ERPLPDNEKQ RKVWLLFEYP ESSQAARVVA IISVFVILLS 240
241 IVIFCLETLP EFKHYKVFNT TTNGTKIEED EVPDITDPFF LIETLCIIWF TFELTVRFLA 300
301 CPNKLNFCRD VMNVIDIIAI IPYFITLATV VAEEEDTLNL PKAPVSPQDK SSNQAMSLAI 360
361 LRVIRLVRVF RIFKLSRHSK GLQILGRTLK ASMRELGLLI FFLFIGVVLF SSAVYFAEAG 420
421 SENSFFKSIP DAFWWAVVTM TTVGYGDMTP VGVWGKIVGS LCAIAGVLTI ALPVPVIVSN 480
481 FNYFYHRETD QEEMQSQNFN HVTSCPYLPG TLGQHMKKSS LSESSSDMMD LDDGVESTPG 540
541 LTETHPGRSA VAPFLGAQQQ QQQPVASSLS MSIDKQL
|
| Detection Method: |  |
| Confidence: | 91.0 |
| Match: | 2a79B |
| Description: | Mammalian Shaker Kv1.2 potassium channel- beta subunit complex |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [578-655] |
1 11 21 31 41 51
| | | | | |
1 QHPLQQLTQT QLYQQQQQQQ QQQQNGFKQQ QQQTQQQLQQ QQSHTINASA AAATSGSGSS 60
61 GLTMRHNNAL AVSIETDV
|
| Detection Method: | |
| Confidence: | 4.69897 |
| Match: | 1lnqA |
| Description: | Potassium channel-related protein MthK |
Matching Structure (courtesy of the PDB): |
|
