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View Structure Prediction Details

Protein: CG6788-PA
Organism: Drosophila melanogaster
Length: 358 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG6788-PA.

Description E-value Query
Range
Subject
Range
gi|76630452 - gi|76630452|ref|XP_589455.2| PREDICTED: similar to Angiopoietin-related protein 2 precursor (Angiopo...
305.0 [0..10] [358..119]

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Predicted Domain #1
Region A:
Residues: [1-358]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFRIMKTAYL ILILSLSIST SLANDPQRSF DQNADNPCSA HRIWVWRPIL DRFAKVNSSD  60
   61 ELKNQVNAMS ETIKDLQTRI GHKNELLLLQ AGQIKDQSAR LNVLIKNMKV LRSECLNAQA 120
  121 EIKSKDIQIQ LSAAKIKQMS NELVTQCSRQ DTCPIDGKGG IYKLKIRELP AFEAPCSSNG 180
  181 WLTIQKRYDG AENFDRGWKD YKDGFGRVRG EFFIGLEKVH LMTRQRRHEL YIKLGKIDGT 240
  241 TSHAHYDNFE LGGEIESYEL KSLGRYNGTA GDSLRPHERQ KFTTNDKDND AYRFNCAADE 300
  301 YGGWWYYDCA KSMLNGKFYK EGRSRNGKTN GILWGSWHNN DWTYSLTFVE MMIRPRID

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 67.045757
Match: 1deqC
Description: Fibrinogen
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle