| Protein: | CG8289-PA |
| Organism: | Drosophila melanogaster |
| Length: | 336 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG8289-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
160.0 | [0..5] | [320..558] |
|
Region A: Residues: [1-108] |
1 11 21 31 41 51
| | | | | |
1 MAKASKKVAE SKRRNGVANE SENEEIDQQK SNGTGRSSRK TPNKRKAKLT VASDSEDSDC 60
61 QTSTSNVDVP AARNKRKVGK ARNATTSPRK NGKKIVIEDS DDDANHSD
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [109-222] |
1 11 21 31 41 51
| | | | | |
1 VDPSADSSPR KPNIKRQTRR SVRGETEDSN ELPSTSKASA HASSPIKKRK LSRASTSSVK 60
61 NGKKVAEKDS ESDVDAGTED EKSAQPQKVA AKSKSSPNAK KAKGRGRRNA GTKK
|
| Detection Method: | |
| Confidence: | 1.19 |
| Match: | 2j63A |
| Description: | No description for 2j63A was found. |
|
Region A: Residues: [223-336] |
1 11 21 31 41 51
| | | | | |
1 ADDSIDPEKQ WEVEKILDHV ATKEGDMFKI RWKKYGPKDD SWEPSKNLAC DALIEKFMRK 60
61 QATQENVDVK ELRESPKKTE RLVDECYPRT NLHNRIERSS KRSSAKNRIF YGEE
|
| Detection Method: | |
| Confidence: | 6.30103 |
| Match: | 2b2uA |
| Description: | Tandem chromodomains of human CHD1 complexed with Histone H3 Tail containing trimethyllysine 4 and dimethylarginine 2 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.374364652893655 | bayes_pls_golite062009 |
