| Protein: | Fim-PD |
| Organism: | Drosophila melanogaster |
| Length: | 641 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Fim-PD.
| Description | E-value | Query Range |
Subject Range |
|
|
498.0 | [0..7] | [622..1] |
|
Region A: Residues: [1-107] |
1 11 21 31 41 51
| | | | | |
1 MADILNVEQH QTVQEFKQNL EELIPNLDAN KDGFIDLHEL KDALNQVGFK LAGYQVREMI 60
61 DEYKGKQLTA FQGKLNLEEF EALCLDLKSK DVASTFKTVV SKKENLE
|
| Detection Method: |  |
| Confidence: | 20.0 |
| Match: | 2f2oA |
| Description: | Structure of calmodulin bound to a calcineurin peptide: a new way of making an old binding mode |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [108-641] |
1 11 21 31 41 51
| | | | | |
1 TLGGMSSISS EGTTHSVRLE EQLAFSDWIN SNLGHDKDLQ HLLPIDSEGK RLYLSIKDGI 60
61 LLCKIINHSC PDTIDERAIN KKNLTVYREF ENLTLALVSS QAIGCNIVNI DAHDLAKGKP 120
121 HLVLGLLWQI IRIGLFSHIT LDSCPGLAGL LFDNERLEDL MKMSPEAILL RWVNHHLERA 180
181 GISRRCTNFQ SDIVDSEIYS HLLKQIAGND ADVNLDALRE SDLQSRAEIM LQQAAKLNCR 240
241 SFLTPQDVVN GVYKLNLAFV ANLFNNHPGL DKPEQIEGLE SIEETREEKT YRNWMNSMGV 300
301 APHVNWLYSD LADGLVIFQL FDVIKPGIVN WSRVHKRFSP LRKFMEKLEN CNYAVDLGKQ 360
361 LKFSLVGIAG QDLNDGNATL TLALIWQLMR AYTLSILSRL ANTGNPIIEK EIVQWVNNRL 420
421 SEAGKQSQLR NFNDPAIADG KIVIDLIDAI KEGSINYELV RTSGTQEDNL ANAKYAISMA 480
481 RKIGARVYAL PEDITEVKPK MVMTVFACMM ALDYVPNMDS VDQNNHNSSA NNSN
|
| Detection Method: | |
| Confidence: | 119.0 |
| Match: | 1rt8A |
| Description: | CRYSTAL STRUCTURE OF THE ACTIN-CROSSLINKING CORE OF SCHIZOSACCHAROMYCES POMBE FIMBRIN |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| actin binding | 7.50245214720686 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 6.48140000563569 | bayes_pls_golite062009 |
| actin filament binding | 5.47084878097979 | bayes_pls_golite062009 |
| tubulin binding | 4.22039137964246 | bayes_pls_golite062009 |
| microtubule binding | 4.15537672860167 | bayes_pls_golite062009 |
| binding | 2.8655705697659 | bayes_pls_golite062009 |
| structural constituent of cytoskeleton | 2.57886434162184 | bayes_pls_golite062009 |
| protein binding | 2.36488136094907 | bayes_pls_golite062009 |
| microtubule plus-end binding | 2.0465241878708 | bayes_pls_golite062009 |
| structural constituent of muscle | 1.32485442580942 | bayes_pls_golite062009 |
| structural molecule activity | 1.00964022808548 | bayes_pls_golite062009 |
