| Protein: | Fim-PA |
| Organism: | Drosophila melanogaster |
| Length: | 640 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Fim-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
508.0 | [0..12] | [621..7] |
|
Region A: Residues: [1-103] |
1 11 21 31 41 51
| | | | | |
1 MATLNKFTKT LSIDEKAEIK EKFIELDANK DGFIDLHELK DALNQVGFKL AGYQVREMID 60
61 EYKGKQLTAF QGKLNLEEFE ALCLDLKSKD VASTFKTVVS KKE
|
| Detection Method: |  |
| Confidence: | 23.69897 |
| Match: | 2f2oA |
| Description: | Structure of calmodulin bound to a calcineurin peptide: a new way of making an old binding mode |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [104-640] |
1 11 21 31 41 51
| | | | | |
1 NLETLGGMSS ISSEGTTHSV RLEEQLAFSD WINSNLGHDK DLQHLLPIDS EGKRLYLSIK 60
61 DGILLCKIIN HSCPDTIDER AINKKNLTVY REFENLTLAL VSSQAIGCNI VNIDAHDLAK 120
121 GKPHLVLGLL WQIIRIGLFS HITLDSCPGL AGLLFDNERL EDLMKMSPEA ILLRWVNHHL 180
181 ERAGISRRCT NFQSDIVDSE IYSHLLKQIA GNDADVNLDA LRESDLQSRA EIMLQQAAKL 240
241 NCRSFLTPQD VVNGVYKLNL AFVANLFNNH PGLDKPEQIE GLESIEETRE EKTYRNWMNS 300
301 MGVAPHVNWL YSDLADGLVI FQLFDVIKPG IVNWSRVHKR FSPLRKFMEK LENCNYAVDL 360
361 GKQLKFSLVG IAGQDLNDGN ATLTLALIWQ LMRAYTLSIL SRLANTGNPI IEKEIVQWVN 420
421 NRLSEAGKQS QLRNFNDPAI ADGKIVIDLI DAIKEGSINY ELVRTSGTQE DNLANAKYAI 480
481 SMARKIGARV YALPEDITEV KPKMVMTVFA CMMALDYVPN MDSVDQNNHN SSANNSN
|
| Detection Method: | |
| Confidence: | 118.0 |
| Match: | 1rt8A |
| Description: | CRYSTAL STRUCTURE OF THE ACTIN-CROSSLINKING CORE OF SCHIZOSACCHAROMYCES POMBE FIMBRIN |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| actin binding | 7.50245214720686 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 6.48140000563569 | bayes_pls_golite062009 |
| actin filament binding | 5.47084878097979 | bayes_pls_golite062009 |
| tubulin binding | 4.22039137964246 | bayes_pls_golite062009 |
| microtubule binding | 4.15537672860167 | bayes_pls_golite062009 |
| binding | 2.8655705697659 | bayes_pls_golite062009 |
| structural constituent of cytoskeleton | 2.57886434162184 | bayes_pls_golite062009 |
| protein binding | 2.36488136094907 | bayes_pls_golite062009 |
| microtubule plus-end binding | 2.0465241878708 | bayes_pls_golite062009 |
| structural constituent of muscle | 1.32485442580942 | bayes_pls_golite062009 |
| structural molecule activity | 1.00964022808548 | bayes_pls_golite062009 |
