| Protein: | baz-PA |
| Organism: | Drosophila melanogaster |
| Length: | 1464 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for baz-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
675.0 | [0..1] | [1464..1] |
|
Region A: Residues: [1-71] |
1 11 21 31 41 51
| | | | | |
1 MKVTVCFGDV RILVPCGSGE LLVRDLVKEA TRRYIKAAGK PDSWVTVTHL QTQSGILDPD 60
61 DCVRDVADDR E
|
| Detection Method: |  |
| Confidence: | 23.045757 |
| Match: | 2ns5A |
| Description: | No description for 2ns5A was found. |
|
Region A: Residues: [72-302] |
1 11 21 31 41 51
| | | | | |
1 QILAHFDDPG PDPGVPQGGG DGASGSSSVG TGSPDIFRDP TNTEAPTCPR DLSTPHIEVT 60
61 STTSGPMAGL GVGLMVRRSS DPNLLASLKA EGSNKRWSAA APHYAGGDSP ERLFLDKAGG 120
121 QLSPQWEEDD DPSHQLKEQL LHQQQPHAAN GGSSSGNHQP FARSGRLSMQ FLGDGNGYKW 180
181 MEAAEKLQNQ PPAQQTYQQG SHHAGHGQNG AYSSKSLPRE SKRKEPLGQA Y
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [303-416] |
1 11 21 31 41 51
| | | | | |
1 ESIREKDGEM LLIINEYGSP LGLTALPDKE HGGGLLVQHV EPGSRAERGR LRRDDRILEI 60
61 NGIKLIGLTE SQVQEQLRRA LESSELRVRV LRGDRNRRQQ RDSKVAEMVE VATV
|
| Detection Method: | |
| Confidence: | 18.154902 |
| Match: | 1q7xA |
| Description: | Solution structure of the alternatively spliced PDZ2 domain (PDZ2b) of PTP-Bas (hPTP1E) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| cytoskeletal protein binding | 3.8598579619264 | bayes_pls_golite062009 |
| actin binding | 2.68527541003929 | bayes_pls_golite062009 |
| binding | 2.6196222853442 | bayes_pls_golite062009 |
| protein binding | 2.35875654816667 | bayes_pls_golite062009 |
| actin filament binding | 1.28158096626765 | bayes_pls_golite062009 |
| receptor binding | 1.19273986711251 | bayes_pls_golite062009 |
| transporter activity | 1.14862709059264 | bayes_pls_golite062009 |
| transmembrane transporter activity | 1.03502943752333 | bayes_pls_golite062009 |
| beta-catenin binding | 0.740091060781601 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 0.724101421194961 | bayes_pls_golite062009 |
| cyclase inhibitor activity | 0.719523854982412 | bayes_pls_golite062009 |
| guanylate cyclase inhibitor activity | 0.719523854982412 | bayes_pls_golite062009 |
| PDZ domain binding | 0.71844819286977 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 0.520243659117793 | bayes_pls_golite062009 |
| cell adhesion molecule binding | 0.403457741099606 | bayes_pls_golite062009 |
| protein domain specific binding | 0.30840185305841 | bayes_pls_golite062009 |
| ErbB-2 class receptor binding | 0.261656236234201 | bayes_pls_golite062009 |
| active transmembrane transporter activity | 0.221504678128513 | bayes_pls_golite062009 |
| molecular transducer activity | 0.211809989510755 | bayes_pls_golite062009 |
| signal transducer activity | 0.211809989510755 | bayes_pls_golite062009 |
|
Region A: Residues: [417-579] |
1 11 21 31 41 51
| | | | | |
1 SPTRKPHAAP VGTSLQVANT RKLGRKIEIM LKKGPNGLGF SVTTRDNPAG GHCPIYIKNI 60
61 LPRGAAIEDG RLKPGDRLLE VDGTPMTGKT QTDVVAILRG MPAGATVRIV VSRQQELAEQ 120
121 ADQPAEKSAG VAVAPSVAPP AVPAAAAPAP PIPVQKSSSA RSL
|
| Detection Method: | |
| Confidence: | 22.30103 |
| Match: | 2fneA |
| Description: | The crystal structure of the 13th PDZ domain of MPDZ |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [580-630] |
1 11 21 31 41 51
| | | | | |
1 FTHQQQSQLN ESQHFIDAGS ESAASNDSLP PSSNSWHSRE ELTLHIPVHD T
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [631-878] |
1 11 21 31 41 51
| | | | | |
1 EKAGLGVSVK GKTCSNLNAS GSSASSGSNG LMKHDGDLGI FVKNVIHGGA ASRDGRLRMN 60
61 DQLLSVNGVS LRGQNNAEAM ETLRRAMVNT PGKHPGTITL LVGRKILRSA SSSDILDHSN 120
121 SHSHSHSNSS GGSNSNGSGN NNNSSSNASD NSGATVIYLS PEKREQRCNG GGGGGSAGNE 180
181 MNRWSNPVLD RLTGGICSSN SAQPSSQQSH QQQPHPSQQQ QQQRRLPAAP VCSSAALRNE 240
241 SYYMATND
|
| Detection Method: | |
| Confidence: | 3.69 |
| Match: | 1z87A |
| Description: | solution structure of the split PH-PDZ Supramodule of alpha-Syntrophin |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [879-950] |
1 11 21 31 41 51
| | | | | |
1 NWSPAQMHLM TAHGNTALLI EDDAEPMSPT LPARPHDGQH CNTSSANPSQ NLAVGNQGPP 60
61 INTVPGTPST SS
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [951-1273] |
1 11 21 31 41 51
| | | | | |
1 NFDATYSSQL SLETNSGVEH FSRDALGRRS ISEKHHAALD ARETGTYQRN KKLREERERE 60
61 RRIQLTKSAV YGGSIESLTA RIASANAQFS GYKHAKTASS IEQRETQQQL AAAEAEARDQ 120
121 LGDLGPSLGM KKSSSLESLQ TMVQELQMSD EPRGHQALRA PRGRGREDSL RAAVVSEPDA 180
181 SKPRKTWLLE DGDHEGGFAS QRNGPFQSSL NDGKHGCKSS RAKKPSILRG IGHMFRFGKN 240
241 RKDGVVPVDN YAVNISPPTS VVSTATSPQL QQQQQQQLQQ HQQQQQIPTA ALAALERNGK 300
301 PPAYQPPPPL PAPNGVGSNG IHQ
|
| Detection Method: | |
| Confidence: | 22.0 |
| Match: | 1kjwA |
| Description: | Psd-95; Guanylate kinase-like domain of Psd-95 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [1274-1464] |
1 11 21 31 41 51
| | | | | |
1 NDIFNHRYQH YANYEDLHQQ HQQHQISRRH QHYHSQRSAR SQDVSMHSTS SGSQPGSLAQ 60
61 PQAQSNGVRP MSSYYEYETV QQQRVGSIKH SHSSSATSSS SSPINVPHWK AAAMNGYSPA 120
121 SLNSSARSRG PFVTQVTIRE QSSGGIPAHL LQQHQQQQLQ QQQPTYQTVQ KMSGPSQYGS 180
181 AAGSQPHASK V
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
