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View Structure Prediction Details

Protein: CG16700-PA
Organism: Drosophila melanogaster
Length: 468 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG16700-PA.

Description E-value Query
Range
Subject
Range
gi|91084137 - gi|91084137|ref|XP_969912.1| PREDICTED: similar to CG8475-PA, isoform A [Tribolium castaneum]
231.0 [0..36] [421..2463]

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Predicted Domain #1
Region A:
Residues: [1-468]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDAEAPNQLE KNQTATVPRQ ETAEGGSTGE TAVGGAAAKV TKEQDHDAEY HPPTSYLETI  60
   61 VHLFKGNIGP GLFAMGDAFK NGGLLVAPLL TVVIAVVSIH CQHVLVTCSK KMRDLKGDSV 120
  121 CADYAQTVEQ CFENGPSKLR GWSRTMGRLV DIFICVTQLG FCCIYFVFIS TNLKQILQAY 180
  181 DIDMNVHLVM LLAFVPVLLS SLITNLKWLT PVSMFANVCM ILGLAITLYY ALKDGLPEVE 240
  241 ERALWTNGSQ LALFFGTAIF AFEGIALVMP LKNAMRKPHQ FERPLGVLNV GMFLVSVMFM 300
  301 FAGSVGYMKW GEQVGGSLTL NLGDTILAQA VKLMVSAGVL LGYPLQFFVA IQIMWPNAKQ 360
  361 MCGIEGRSLL GELGFRTFMV LVTLAIAEMV PALGLFISLI GALCSTALAL VFPPVIELIS 420
  421 RSELNKGPGI WICVKNLVIL VLALLGFFTG SYESLKQIVK HFGEEEVH

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.39
Match: 2a65A
Description: Crystal structure of LEUTAA, a bacterial homolog of Na+/Cl--dependent neurotransmitter transporters
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle