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View Structure Prediction Details

Protein: FBpp0309739, wus-PA
Organism: Drosophila melanogaster
Length: 406 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBpp0309739, wus-PA.

Description E-value Query
Range
Subject
Range
gi|125980615, gi... - gi|54642638|gb|EAL31384.1| GA21533 [Drosophila pseudoobscura pseudoobscura], gi|125980615|ref|XP_001...
gi|54642638|gb|E... - GA21533-PA [Drosophila pseudoobscura], GA21533 [Drosophila pseudoobscura pseudoobscura]
371.0 [0..1] [403..1]

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Predicted Domain #1
Region A:
Residues: [1-125]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGTTQTVSPV AGKDKTNDTS KGSPSKAKSN GHAQGKTKSK EMNALPPQKS VVIAYLCWLF  60
   61 GGIFGLHHLY LHRDRHAFIW WCTLGGYMGI GWMGELFLIP EYVRDANEDP KFVKMFVAKL 120
  121 QAYPK

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [126-308]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PPYSSKRFVG QVMIGHLFGQ VCSMAIPETL VGGWDLSFLH WTIPLFVSLG VWLVGNIGRE  60
   61 QGVWWHCLVA AYLAYPARYL IYDETYSLLL TGLVAALTFD GLSKQWRRTP PRRGSPGERT 120
  121 FKLTTAVIIY CAFWGSFLYF NGTISDEDGG EVPIHEAIHN FLASAWWTDL KQALLDTYNY 180
  181 AQH

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [309-406]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 HGWYETWKEV FESMDVDGER NSYKVLGVSA TASQAEITAA YRKLSKEYHP DKVKDEGLRA  60
   61 QAHQRFIEIQ QAYSVLSKIK SNRRRKNKQY QEEEAIVL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 22.0
Match: 1bq0A
Description: J-DOMAIN (RESIDUES 1-77) OF THE ESCHERICHIA COLI N-TERMINAL FRAGMENT (RESIDUES 1-104) OF THE MOLECULAR CHAPERONE DNAJ, NMR, 20 STRUCTURES
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
protein binding 0.91382566433746 bayes_pls_golite062009
binding 0.854995550776775 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle