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View Structure Prediction Details

Protein: CG9903-PA
Organism: Drosophila melanogaster
Length: 454 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG9903-PA.

Description E-value Query
Range
Subject
Range
gi|54650686 - gi|54650686|gb|AAV36922.1| LP23579p [Drosophila melanogaster]
252.0 [0..8] [454..1]

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Predicted Domain #1
Region A:
Residues: [1-135]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGNVNKNIGR LLVAVGVLMI LGLQGVRSEY GDLAGNWLVD YDRDELNFFE DSTWSVDLHI  60
   61 YNVLPKDSSL DYYFVVYSKD DRRASSPPLE IKKEDFDLLG SWRGALYVTG VRFGYSSLEV 120
  121 ELKSGAVTET YPKPL

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [136-355]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PITVLRTQVV DERITTYVSA ALALLMFLNL GTVLDMQRLA GIICRPVGPV VGVVSRFVLM  60
   61 PAVGFGLGRA LWPDSWPLQL ALFYTALSPS GGLANVCAVF LKGNINLSVA TTTINSLLAL 120
  121 ALLPIWILVL GRILYEDDEL TVPFGQLSGG AAALVACLAI GVLLRLCLPR TTRFIFRFLK 180
  181 PLSVVLSLCL VGLTVGLNSF VFYEFTWQIL VAAVCLPLAG 

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 9.79588
Match: PF01758.7
Description: No description for PF01758.7 was found.

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [356-454]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 YLSTYLLSKI LCRSSTDALT LAIEASVLNM TMPIVLLQSS QLQQPQLDLV LVVPIASSLI  60
   61 SLVLVVLFYG IRRCLGCNRQ QDADAFDHKK LLAEQEGDV

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle