YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: sun-PA
Organism: Drosophila melanogaster
Length: 61 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for sun-PA.

Description E-value Query
Range
Subject
Range
ATP5E_ARATH - ATP synthase subunit epsilon, mitochondrial OS=Arabidopsis thaliana GN=At1g51650 PE=1 SV=3
100.0 [0..4] [61..10]
ATP5E_IPOBA - ATP synthase subunit epsilon, mitochondrial OS=Ipomoea batatas PE=1 SV=2
99.0 [0..4] [61..10]
gi|21068676 - gi|21068676|emb|CAD31844.1| putative epsilon subunit of mitochondrial F1-ATPase [Cicer arietinum]
98.0 [0..4] [60..10]
gi|25044815 - gi|25044815|gb|AAM28278.1| ATP synthase epsilon subunit [Ananas comosus]
96.0 [0..4] [61..17]
gi|55243554, gi|... - gi|58380900|ref|XP_310858.2| ENSANGP00000012584 [Anopheles gambiae str. PEST], gi|55243554|gb|EAA067...
96.0 [0..1] [54..30]
ATP5E_MAIZE - ATP synthase subunit epsilon, mitochondrial OS=Zea mays PE=3 SV=1
92.0 [0..4] [61..11]
gi|50942951, gi|... - gi|50942951|ref|XP_481003.1| putative ATP synthase epsilon chain, mitochondrial [Oryza sativa (japon...
92.0 [0..4] [59..11]
gi|157104383, gi... - gi|157104383|ref|XP_001648383.1| hypothetical protein AaeL_AAEL004060 [Aedes aegypti], gi|108880367|...
88.0 [0..1] [54..1]

Back

Predicted Domain #1
Region A:
Residues: [1-61]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTAWRAAGIT YIQYSNIAAR ILRESLKTGL RADAAKRDAS HVKFTPWANG KPAQRQTQSE  60
   61 S

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.447 a.35.1 lambda repressor-like DNA-binding domains
View Download 0.396 a.35.1 lambda repressor-like DNA-binding domains
View Download 0.333 d.349.1 Description not found.
View Download 0.330 a.65.1 Annexin
View Download 0.293 a.64.1 Saposin
View Download 0.279 a.126.1 Serum albumin-like
View Download 0.265 a.69.4 Description not found.
View Download 0.251 a.4.1 Homeodomain-like
View Download 0.246 d.88.1 SRF-like


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle