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View Structure Prediction Details

Protein: mRpL3-PA
Organism: Drosophila melanogaster
Length: 362 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for mRpL3-PA.

Description E-value Query
Range
Subject
Range
gi|21430844 - gi|21430844|gb|AAM51100.1| SD19562p [Drosophila melanogaster]
355.0 [0..1] [362..1]

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Predicted Domain #1
Region A:
Residues: [1-96]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMRSVINQLL GLRLSGNSSV LVTQVRDKGH LSRPRLRNPQ WFLRKEITKY NDLMTAENKQ  60
   61 FVNEVGTNNF GVPAVIKDSL VKTAGPTANE AVWTPN

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [97-362]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LRRCGVIARK IGQYPLWLKN GERIRTTLLQ IVDNHVIKYI PPEEYLPAQV PTVANLHKRG  60
   61 CILVGSETTN PALLTKEYAG IFRNSGVLPK KNLARFIVSP EAQLAPGTPL NVNHFRVGDF 120
  121 VDVRGKTVDH GFQGVVKRHG FKGMPASHGV TKTHRRAGNI GGGGEKGRVW PGTKMPGHMG 180
  181 NRWRIIKGLR VWRINTKYNV MWVQGSSVAG PTGGLVYIYD TILPTRKNKE APPFPTFYGE 240
  241 PQQDGDDVWY EQVHNFKSES ITYENE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 56.09691
Match: 2ftcC
Description: No description for 2ftcC was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle