YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|24642261, gi\|...
Organism:	Drosophila melanogaster
Length:	83 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

[What does the above image mean?]

[Show Ginzu Version Information]

Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|24642261, gi|....

Description	E-value	Query Range	Subject Range
gi\|42415411 - gi\|42415411\|gb\|AAS15675.1\| LP13032p [Drosophila melanogaster]	150.0	[0..1]	[83..97]
gi\|76676986 - gi\|76676986\|ref\|XP_591925.2\| PREDICTED: similar to CG12379-PA [Bos taurus]	144.0	[0..2]	[79..106]
gi\|109109820 - gi\|109109820\|ref\|XP_001117966.1\| PREDICTED: similar to CG12379-PA [Macaca mulatta]	142.0	[0..2]	[79..70]
DNLZ_MOUSE - DNL-type zinc finger protein OS=Mus musculus GN=Dnlz PE=1 SV=1	141.0	[0..2]	[79..74]
gi\|114627557 - gi\|114627557\|ref\|XP_520365.2\| PREDICTED: similar to OTTHUMP00000022587 [Pan troglodytes]	140.0	[0..2]	[79..70]
DNLZ - DNL-type zinc finger	139.0	[0..2]	[79..70]
gi\|73967558 - gi\|73967558\|ref\|XP_849286.1\| PREDICTED: similar to CG12379-PA [Canis familiaris]	139.0	[0..2]	[79..63]
gi\|109469628, gi... - gi\|34853079\|ref\|XP_216011.2\| PREDICTED: similar to CG12379-PA [Rattus norvegicus], gi\|109469628\|ref\|...	138.0	[0..2]	[79..120]
DNLZ_XENLA - DNL-type zinc finger protein OS=Xenopus laevis GN=dnlz PE=2 SV=1	134.0	[0..2]	[82..83]
gi\|54644000, gi\|... - gi\|54644000\|gb\|EAL32743.1\| GA11595-PA [Drosophila pseudoobscura], gi\|125983838\|ref\|XP_001355684.1\| G...	134.0	[0..1]	[81..1]

Back

Predicted Domain #1

Region A:
Residues: [1-83]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQLIYTCKVC QTRNMKTISK LAYQRGVVIV TCEGCSNHHL IADNLNWFTD LDGKRNIEEI  60
   61 LAEKGEKVVR LTDGNCEFLP KHD

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	23.39794
Match:	2e2zA
Description:	No description for 2e2zA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits