| Protein: | Gmap-PB, FBpp0310129 |
| Organism: | Drosophila melanogaster |
| Length: | 1208 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Gmap-PB, FBpp0310129.
| Description | E-value | Query Range |
Subject Range |
|
|
497.0 | [0..1] | [1060..1856] |
|
Region A: Residues: [1-313] |
1 11 21 31 41 51
| | | | | |
1 MRDVLEHKTQ LAGQVASLKQ LQADRLVEHE LSNARQQKQL DELRQTSSAA KKQQEELQRR 60
61 VEQQEAELIE MQDLLDKRRQ DTAELIERVR VAETERERLL KDLEETRQAK EKKTSESSSN 120
121 SSSTGKHSED EFIVVRQADA TGSGSASGSD RDPDADVTSP PSKEKLRDRL VSLESQISEL 180
181 TLANTQLQDA QLEKQLSINM LGEQLVELEK RLRLSEAEKE QLQVNLQLRL QQLTVQNQEL 240
241 KLHAEAEQEG HAQNLEEQLG DLREDNQRLR QELKTSIAQA KFRQAIAEEK QEITDLDDAD 300
301 SEYGTFELDK LRA
|
| Detection Method: |  |
| Confidence: | 25.0 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [314-678] |
1 11 21 31 41 51
| | | | | |
1 LLQAEIEDRL DSSFPQQKLE RAWNALKDRW HRLDLVEQRL VDVQNQQLVS EHEKKTLEAD 60
61 ISQYILQCDE LMKNNDLLLN ELDKYKRNKL ETIEEHHEET IVQLEAQLEE ARQKLELASL 120
121 SSQQQMETHL ISSPEKTPVD SELLAKMEQK EQEYLQLQEQ LAFAKTELDK RNKLLERNGE 180
181 QLTKQQQQNQ ADQKKLEELS QLRETLQRRD EDLKELEEQL SAVRQDLDEK SIQMKISQDQ 240
241 HKLQLANLQN QLQADQEKLR ELLQLQDKLE QQKELMEVDQ NQQITIIKKE LAETTNQLSE 300
301 CQERLTVKEA QLAEIQQQLQ EVNEERTRLQ EQLLTKEQES GLDSELAKRN QELEDQLLAK 360
361 EQQLQ
|
| Detection Method: | |
| Confidence: | 2.61 |
| Match: | 1c1gA |
| Description: | Tropomyosin |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [679-806] |
1 11 21 31 41 51
| | | | | |
1 LNQAELEKLQ ETLRVNEEQL LAKEEQLHAK ESQLQSLESQ LQGQLAADES QQLQQTIDGL 60
61 GQEKNELIKV LQQKHQENTQ YYAEIQRLQP FEQQVKELVK EREKLQDQVG FLKEKSDILT 120
121 TNLLTEQT
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [807-1208] |
1 11 21 31 41 51
| | | | | |
1 NQRLLQQQQA ESQEQQASTL RDLERLRAHL LEIEELHTQE TVELQRDLEE SRSRQAILEQ 60
61 QVSKSSTAYT SASIRANQQA ETLQAQHALL QQQRDELLAK LGQYEDRELK QQAALTNLQC 120
121 ALEQFQNDKD HDIEMATQRI RREMQAQLDR QGQLQLEMSG LQQQLAEANQ GLRAAARLSD 180
181 QLEAGQQTIA VLRDEVESLK EANGQLEQRL SSSESSQTDK IDKSLIKSLL IGYVVSGHAG 240
241 DKQQVLRMIS SVLDFNAQEA DKVGLNKQQS SWLGAILGGG SATASAAGSS RGNENLVQAF 300
301 VQFLEQESQP QAQSRPTLLS MTGQMDGVTS ASATTSTAAT SGHLPQASSS FSPATPAASQ 360
361 QDPAAPRTPP VGGSPQLLAM GSNEFAPTRN SSSILKDILS DS
|
| Detection Method: | |
| Confidence: | 9.045757 |
| Match: | 1c1gA |
| Description: | Tropomyosin |
| Matching Structure (courtesy of the PDB): |
|
