| Protein: | Gmap-PA |
| Organism: | Drosophila melanogaster |
| Length: | 1398 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Gmap-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
469.0 | [0..1] | [1398..873] |
|
Region A: Residues: [1-169] |
1 11 21 31 41 51
| | | | | |
1 MSWLNSSLSQ LKGQLTNLAQ EVLAETAGPG DLEYEGHQAG GASVQDAEQQ AKTALELLAE 60
61 TQEQKEQLDK RCEEKDREIA ALRRELAKSK QKQESQLAAS TSATREPQLQ NEEPNVEDSW 120
121 CWEPDGGDEK GATGAGSGDS ASRDKESGLV DIALGNDDVV RLNNRIAEL
|
| Detection Method: |  |
| Confidence: | 5.69897 |
| Match: | 2i1jA |
| Description: | No description for 2i1jA was found. |
|
Region A: Residues: [170-507] |
1 11 21 31 41 51
| | | | | |
1 EQLNEQLNVS LEELDSQHEL AMRDVLEHKT QLAGQVASLK QLQADRLVEH ELSNARQQKQ 60
61 LDELRQTSSA AKKQQEELQR RVEQQEAELI EMQDLLDKRR QDTAELIERV RVAETERERL 120
121 LKDLEETRQA KEKKTSESSS NSSSTGKHSE DEFIVVRQAD ATGSGSASGS DRDPDADVTS 180
181 PPSKEKLRDR LVSLESQISE LTLANTQLQD AQLEKQLSIN MLGEQLVELE KRLRLSEAEK 240
241 EQLQVNLQLR LQQLTVQNQE LKLHAEAEQE GHAQNLEEQL GDLREDNQRL RQELKTSIAQ 300
301 AKFRQAIAEE KQEITDLDDA DSEYGTFELD KLRALLQA
|
| Detection Method: | |
| Confidence: | 25.0 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [508-586] |
1 11 21 31 41 51
| | | | | |
1 EIEDRLDSSF PQQKLERAWN ALKDRWHRLD LVEQRLVDVQ NQQLVSEHEK KTLEADISQY 60
61 ILQCDELMKN NDLLLNELD
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [587-629] |
1 11 21 31 41 51
| | | | | |
1 KYKRNKLETI EEHHEETIVQ LEAQLEEARQ KLELASLSSQ QQM
|
| Detection Method: | |
| Confidence: | 3.522879 |
| Match: | 2iw5A |
| Description: | No description for 2iw5A was found. |
|
Region A: Residues: [630-836] |
1 11 21 31 41 51
| | | | | |
1 ETHLISSPEK TPVDSELLAK MEQKEQEYLQ LQEQLAFAKT ELDKRNKLLE RNGEQLTKQQ 60
61 QQNQADQKKL EELSQLRETL QRRDEDLKEL EEQLSAVRQD LDEKSIQMKI SQDQHKLQLA 120
121 NLQNQLQADQ EKLRELLQLQ DKLEQQKELM EVDQNQQITI IKKELAETTN QLSECQERLT 180
181 VKEAQLAEIQ QQLQEVNEER TRLQEQL
|
| Detection Method: | |
| Confidence: | 4.0 |
| Match: | 2dfsA |
| Description: | No description for 2dfsA was found. |
|
Region A: Residues: [837-1113] |
1 11 21 31 41 51
| | | | | |
1 LTKEQESGLD SELAKRNQEL EDQLLAKEQQ LQLNQAELEK LQETLRVNEE QLLAKEEQLH 60
61 AKESQLQSLE SQLQGQLAAD ESQQLQQTID GLGQEKNELI KVLQQKHQEN TQYYAEIQRL 120
121 QPFEQQVKEL VKEREKLQDQ VGFLKEKSDI LTTNLLTEQT NQRLLQQQQA ESQEQQASTL 180
181 RDLERLRAHL LEIEELHTQE TVELQRDLEE SRSRQAILEQ QVSKSSTAYT SASIRANQQA 240
241 ETLQAQHALL QQQRDELLAK LGQYEDRELK QQAALTN
|
| Detection Method: | |
| Confidence: | 2.23 |
| Match: | 1c1gA |
| Description: | Tropomyosin |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [1114-1398] |
1 11 21 31 41 51
| | | | | |
1 LQCALEQFQN DKDHDIEMAT QRIRREMQAQ LDRQGQLQLE MSGLQQQLAE ANQGLRAAAR 60
61 LSDQLEAGQQ TIAVLRDEVE SLKEANGQLE QRLSSSESSQ TDKIDKSLIK SLLIGYVVSG 120
121 HAGDKQQVLR MISSVLDFNA QEADKVGLNK QQSSWLGAIL GGGSATASAA GSSRGNENLV 180
181 QAFVQFLEQE SQPQAQSRPT LLSMTGQMDG VTSASATTST AATSGHLPQA SSSFSPATPA 240
241 ASQQDPAAPR TPPVGGSPQL LAMGSNEFAP TRNSSSILKD ILSDS
|
| Detection Method: | |
| Confidence: | 12.522879 |
| Match: | 2tmaA |
| Description: | Tropomyosin |
Matching Structure (courtesy of the PDB): |
|
