| Protein: | CG6227-PA |
| Organism: | Drosophila melanogaster |
| Length: | 1224 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG6227-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
573.0 | [0..259] | [1213..106] |
|
Region A: Residues: [1-93] |
1 11 21 31 41 51
| | | | | |
1 MSKSSGRDRD RERDRERERE RDRERERDRD RERDNRHDSR SRDYDMGKSR NGGGGGAGGG 60
61 SRNMREDRKR GKDMISDRGK RDDKRRKCSR SKD
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [94-216] |
1 11 21 31 41 51
| | | | | |
1 YEKDNSPHYR RLDKDRDRDR DRDRQREKER EREKEKEREK EKERERDKDR ERDRQREKES 60
61 DSRRAAAAAP LIIPLLSTSC SEEEVEEIDK EEQQRRLEQE MIKRRERIER WRAERKRDTK 120
121 AAV
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [217-458] |
1 11 21 31 41 51
| | | | | |
1 VAPSLVNSAK KWSLEDESEE DDSNPAPPLD SGKKDAEPDS PPSKFHSIRK RFDDDVVESK 60
61 FSPVKRPTFS KSFGKLGIGL ATKAEADIKK EPPPVDTKKE IKKKPEPVAA KMEIVEEPTV 120
121 AAGEKTKKEP EQPHVGAKSE PEVEDKPQPE AEPEDEIDPL DAYMQEVNNE MRRVNNFVNP 180
181 PAKSQGVVIL TGVAKKKTTT LKKGEVIEQN MDSLEYSSED ELEDIRDTAV NLAMKHRKEL 240
241 AK
|
| Detection Method: | |
| Confidence: | 1.45 |
| Match: | 1h1kI |
| Description: | THE BLUETONGUE VIRUS (BTV) CORE BINDS DSRNA |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [459-509] |
1 11 21 31 41 51
| | | | | |
1 IDHSSVTYAP FRKNFYVEVP ELTRMTAADV EKYRSDLEGI QVKGKGCPKP I
|
| Detection Method: | |
| Confidence: | 109.0 |
| Match: | 2db3A |
| Description: | No description for 2db3A was found. |
|
Region A: Residues: [510-713] |
1 11 21 31 41 51
| | | | | |
1 KTWAQCGVSK KEMEVLRRLG FEKPTPIQCQ AIPAIMSGRD LIGIAKTGSG KTLAFILPMF 60
61 RHILDQPSME DGDGAIAIIM APTRELCMQI GKDIRKFSKS LGLRPVCVYG GTGISEQIAE 120
121 LKRGAEIIVC TPGRMIDMLA ANSGRVTNLR RVTYVVLDEA DRMFDMGFEP QVMRIIDNVR 180
181 PDRQTVMFSA TFPRQMEALA RRIL
|
| Detection Method: | |
| Confidence: | 9.43 |
| Match: | 2gxqA |
| Description: | No description for 2gxqA was found. |
|
Region A: Residues: [714-941] |
1 11 21 31 41 51
| | | | | |
1 KKPIEVIVGG RSVVCKEVEQ HVVILNDDAK FFKLLELLGI YQEAGSIIVF VDKQENADIL 60
61 LRDLMKASYP CMSLHGGIDQ FDRDSTIIDF KSGKVRLLIA TSVAARGLDV KDLILVVNYD 120
121 VPNHYEDYVH RCGRTGRAGK KGSAYTFITP EQSRYAGDII RAMDLSGTLI PAELQALWTE 180
181 YKALQEAEGK TVHTGGGFSG KGFKFDEQEF NAAKESKKLQ KAALGLAD
|
| Detection Method: | |
| Confidence: | 38.221849 |
| Match: | 2hjvA |
| Description: | No description for 2hjvA was found. |
|
Region A: Residues: [942-1112] |
1 11 21 31 41 51
| | | | | |
1 SDDEEDIEQD IDQQIEQIFA AKRTVKDTSA AATAAAAAAA AAAAAAAAVS GANPALASAA 60
61 AQAAAAAAAA NIAIAAASAP AAAGGAPSVA MGGALSSDKL ELAKRLASKI NSSKNLDTKG 120
121 SVVTVEPMIK GPHVTGAAAT LLTARTVAEQ MAAKLNNKLN YQPKEDEEGL G
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1113-1224] |
1 11 21 31 41 51
| | | | | |
1 PLVGGTTNPF TKYEEELEIN DFPQQARWKV TSKEALAQIS EYSEAGLTVR GTYVPQGKNP 60
61 PDGERKLYLA IESCSELAVQ KAKREITRLI KEELLKLSSA HHVFNKGRYK VV
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
