| Protein: | Lsd-2-PA |
| Organism: | Drosophila melanogaster |
| Length: | 352 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Lsd-2-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
320.0 | [0..1] | [352..1] |
|
Region A: Residues: [1-140] |
1 11 21 31 41 51
| | | | | |
1 MASAEQKHAT GNGTTGNGTA MNDVDQPKDA KDLLPHLESL ERIIKLPVVN AAWDKSQDVY 60
61 GKVKGKNRVF EWALTAAEDC VTRAVTTAAP FVTKLDRPIA YVDQTLVKGI DKLEVKAPII 120
121 KDTPQEIYNQ AKSKVIDVVQ
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [141-352] |
1 11 21 31 41 51
| | | | | |
1 PHLERVVKFK AAGQQKAASL KDLAWQKANE VLATQYGSLA VNGVDTTTAL AERLLEYYFP 60
61 KCESDVEEDN DDKQNAVVQN GKSSENDMPV PASEDPVLHT VQTVGRLSNK ISRRVYRNVS 120
121 RQIKQVQKGN INDYLSSLIA ALKLHQYINF INSSMGTNVE QSGGSSSDAC SPFGTTTSTT 180
181 TTTTTSSTSN NKPVVALPHV AKSKRAPAVS SQ
|
| Detection Method: | |
| Confidence: | 31.522879 |
| Match: | 1sziA |
| Description: | Crystal Structure of the C-terminus of TIP47 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.1669494783649 | bayes_pls_golite062009 |
| protein binding | 0.505707524948553 | bayes_pls_golite062009 |
