YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: nmdyn-D6-PA
Organism: Drosophila melanogaster
Length: 151 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for nmdyn-D6-PA.

Description E-value Query
Range
Subject
Range
gi|79160090, gi|... - gi|79160090|gb|AAI07895.1| NME1-NME2 protein [Homo sapiens], gi|119614969|gb|EAW94563.1| hCG2001850,...
238.0 [0..1] [150..144]

Back

Predicted Domain #1
Region A:
Residues: [1-151]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEITLALIKP HVLRNTYAMQ QIRALISQNF TILDQKEVCI TKELSERFYA EHKGKFFYHR  60
   61 LTSFMNSGPS YALILQSETC IQKWRSLLGP TKVFRAVYSD PNCIRALYGI SDTRNACHGS 120
  121 DSEASALREI SILFPEFDAA VGSRQAKREE A

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 62.0
Match: 1nueA
Description: Nucleoside diphosphate kinases
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle