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View Structure Prediction Details

Protein: FBpp0309518, FBp...
Organism: Drosophila melanogaster
Length: 913 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBpp0309518, FBp....

Description E-value Query
Range
Subject
Range
FBpp0309513 - type=protein; loc=X:join(13590847..13591276,13600181..13600359,13603438..13603590,13603862..13604813...
1040.0 [0..1] [913..289]

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Predicted Domain #1
Region A:
Residues: [1-251]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLAGGGECA PGKLNSVSKM INNVDNRSTS ASLDDNDDYY DDEYDTSGGY CGGSGEAKEK  60
   61 AIIKDLIEAK KKRYQEEAEV TPVGGGTARN SRAASRSEAS KDASDIDDIW KNNTSEYKPA 120
  121 SPRYVLSQFG KNVTKAVIDR IVDHEDLVPP SGSQKVSNQF AVGPVKLPKT NIARLEVAFE 180
  181 RSACQDRSKS RLKKKMSSSR RRRESTSDED SSSSSLGNEE DEEVDDSDSD AENTGSGIGL 240
  241 RRILGSYSAR L

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [252-442]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 AGGAEKCPCP GSGSVSDTET LVGDESRSRL AGSNGLHQQD VVCSRNRQAQ SRSPLRSVPH  60
   61 THAATVAAAA AALARGRNRD KDGCLGGKDE KNMGMGVGTT GTSSMGTRTS SPVRNNVFRL 120
  121 SKDQHILLNS MTSQETTGTL ISSTSTNQTT TTTNSSQSFL CSDLPQAQFS RSAVGGARFM 180
  181 TNCHPMNPEE Y

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [443-913]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DGLEFESRFE SGNLAKAVQI TPTYYELYLR PDLYTSRSKQ WFYFRVRRTR RKMLYRFSIV  60
   61 NLVKSDSLYN DGMQPVMYST LGAKEKSEGW RRCGDNICYY RNDDESASSS ANEDDEDNST 120
  121 YTLTFTIEFE HDDDTVFFAH SYPYTYSDLQ DYLMEIQRHP VKSKFCKLRL LCRTLAGNNV 180
  181 YYLTVTAPSS NEENMRRKKS IVVSARVHPS ETPASWMMKG LMDFITGDTT VAKRLRHKFI 240
  241 FKLVPMLNPD GVIVGNTRNS LTGKDLNRQY RTVIRETYPS IWYTKAMIRR LIEECGVAMY 300
  301 CDMHAHSRKH NIFIYGCENK RNPEKKLTEQ VFPLMLHKNS ADRFSFESCK FKIQRSKEGT 360
  361 GRIVVWMLGI TNSYTIEASF GGSSLGSRKG THFNTQDYEH MGRAFCETLL DYCDENPNKV 420
  421 KRHAKLFKQI KKIRKREKRE QKALKLQKMA DQGCIMNDKL KVKRSVEKSV S

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 69.30103
Match: 1kwmA
Description: Carboxypeptidase B; Procarboxypeptidase B
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.868869462173853 bayes_pls_golite062009
hydrolase activity 0.66015973787775 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle